Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL078595.2-201ENST00000605309 1780 ntBASIC4.36□□□□□ -1.71
COL16A1Q07092 AC009313.2-201ENST00000417893 1941 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 SNORA71.1-201ENST00000364523 117 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 RNU6-304P-201ENST00000364855 107 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 SNORA70B-201ENST00000384210 135 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.35□□□□□ -1.71
COL16A1Q07092 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.35□□□□□ -1.71
COL16A1Q07092 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.35□□□□□ -1.71
COL16A1Q07092 ATP5HP2-201ENST00000433885 485 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.35□□□□□ -1.71
COL16A1Q07092 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.35□□□□□ -1.71
COL16A1Q07092 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.35□□□□□ -1.71
COL16A1Q07092 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL16A1Q07092 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.35□□□□□ -1.71
COL16A1Q07092 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL16A1Q07092 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.35□□□□□ -1.71
COL16A1Q07092 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL16A1Q07092 SMC4P1-201ENST00000414479 527 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.35□□□□□ -1.71
COL16A1Q07092 RPS20P32-201ENST00000456044 356 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.35□□□□□ -1.71
COL16A1Q07092 COX6CP8-201ENST00000522620 226 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AL139174.1-201ENST00000531489 886 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.35□□□□□ -1.71
COL16A1Q07092 LSM1P2-201ENST00000604911 322 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 AC018690.1-201ENST00000608144 626 ntBASIC4.35□□□□□ -1.71
COL16A1Q07092 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.34□□□□□ -1.71
COL16A1Q07092 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL16A1Q07092 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL16A1Q07092 AC005261.6-201ENST00000623072 1387 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL16A1Q07092 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL16A1Q07092 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.34□□□□□ -1.71
COL16A1Q07092 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
COL16A1Q07092 SRIP2-201ENST00000428470 166 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL16A1Q07092 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.34□□□□□ -1.71
COL16A1Q07092 RPS4XP13-201ENST00000483219 789 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.34□□□□□ -1.71
COL16A1Q07092 RNU6-362P-201ENST00000516736 90 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 AC010306.1-201ENST00000523223 1117 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.34□□□□□ -1.71
COL16A1Q07092 EIF4EP5-201ENST00000528228 640 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.34□□□□□ -1.71
COL16A1Q07092 HMGN2P47-201ENST00000559378 272 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.34□□□□□ -1.71
COL16A1Q07092 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
COL16A1Q07092 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.34□□□□□ -1.71
COL16A1Q07092 AC005014.3-201ENST00000605985 190 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 uc_338.25-201ENST00000613756 156 ntBASIC4.34□□□□□ -1.71
COL16A1Q07092 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 AC240504.1-201ENST00000395709 845 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 RN7SKP56-201ENST00000410513 331 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 RN7SKP220-201ENST00000410611 288 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.33□□□□□ -1.72
COL16A1Q07092 AC019097.1-201ENST00000424783 735 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 MYL8P-204ENST00000431574 518 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 UBE2V2P3-201ENST00000433562 437 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.33□□□□□ -1.72
COL16A1Q07092 RWDD4P1-201ENST00000488019 565 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.33□□□□□ -1.72
COL16A1Q07092 HMGB1P3-201ENST00000502802 616 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.33□□□□□ -1.72
COL16A1Q07092 AC114781.4-201ENST00000513707 639 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.33□□□□□ -1.72
COL16A1Q07092 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.33□□□□□ -1.72
COL16A1Q07092 SULT1C2P2-201ENST00000562517 294 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.33□□□□□ -1.72
COL16A1Q07092 AC007619.2-201ENST00000605743 379 ntBASIC4.33□□□□□ -1.72
COL16A1Q07092 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL16A1Q07092 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.32□□□□□ -1.72
COL16A1Q07092 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.32□□□□□ -1.72
COL16A1Q07092 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
COL16A1Q07092 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.32□□□□□ -1.72
COL16A1Q07092 AC074367.1-201ENST00000438685 1125 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.32□□□□□ -1.72
COL16A1Q07092 RPS17P11-201ENST00000474297 293 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.32□□□□□ -1.72
COL16A1Q07092 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL16A1Q07092 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.32□□□□□ -1.72
COL16A1Q07092 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.32□□□□□ -1.72
COL16A1Q07092 AL133445.2-201ENST00000611191 527 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 AL669942.2-201ENST00000620352 697 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL16A1Q07092 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL16A1Q07092 AF117829.1-206ENST00000621883 3802 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.32□□□□□ -1.72
COL16A1Q07092 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL16A1Q07092 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL16A1Q07092 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL16A1Q07092 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL16A1Q07092 SNORA18.3-201ENST00000384122 132 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 MIR513A2-201ENST00000385249 127 ntBASIC4.32□□□□□ -1.72
COL16A1Q07092 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms