Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS3P1-201ENST00000456781 192 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AC133134.1-201ENST00000466800 359 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AC104687.1-201ENST00000485829 412 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 AL590808.1-201ENST00000618696 141 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 AL138820.1-201ENST00000617901 5305 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 MIR34A-201ENST00000385130 110 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AL360182.1-201ENST00000397433 468 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 YWHAEP5-201ENST00000431545 765 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 RPL37P4-201ENST00000448908 268 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 BRDTP1-201ENST00000605735 677 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AL356274.1-201ENST00000617064 410 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.97□□□□□ -2.09
HSPG2P98160 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 RPL21P40-201ENST00000428586 483 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC1.97□□□□□ -2.09
HSPG2P98160 RN7SKP31-201ENST00000516354 278 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 SCARNA20.6-201ENST00000517251 106 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HSPG2P98160 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 AC233309.1-201ENST00000619522 751 ntBASIC1.97□□□□□ -2.09
HSPG2P98160 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HSPG2P98160 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HSPG2P98160 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
HSPG2P98160 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.96□□□□□ -2.09
HSPG2P98160 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
HSPG2P98160 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
HSPG2P98160 RHOT1P2-201ENST00000366423 333 ntBASIC1.96□□□□□ -2.09
HSPG2P98160 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.96□□□□□ -2.09
HSPG2P98160 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC1.96□□□□□ -2.09
HSPG2P98160 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.96□□□□□ -2.09
HSPG2P98160 LYZ-203ENST00000549690 669 ntTSL 2 BASIC1.96□□□□□ -2.09
HSPG2P98160 SNORD53-201ENST00000579969 78 ntBASIC1.96□□□□□ -2.09
HSPG2P98160 AC015849.2-201ENST00000605738 409 ntBASIC1.96□□□□□ -2.09
HSPG2P98160 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.96□□□□□ -2.1
HSPG2P98160 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 DCAF13P3-201ENST00000561147 1334 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 AC073325.2-201ENST00000339545 159 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 SKP1P1-201ENST00000438081 489 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AC016696.1-201ENST00000446949 318 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.96□□□□□ -2.1
HSPG2P98160 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC1.96□□□□□ -2.1
HSPG2P98160 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC1.96□□□□□ -2.1
HSPG2P98160 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1.96□□□□□ -2.1
HSPG2P98160 AL592295.2-201ENST00000612578 206 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AL732372.2-225ENST00000642124 456 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HSPG2P98160 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HSPG2P98160 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.96□□□□□ -2.1
HSPG2P98160 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 TRGV5P-201ENST00000419915 354 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 RPL21P109-201ENST00000422213 475 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.96□□□□□ -2.1
HSPG2P98160 FTH1P6-201ENST00000430768 320 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AC112653.1-201ENST00000443851 386 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AL513328.1-201ENST00000446460 224 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AC021205.1-201ENST00000468797 348 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 ANXA2P1-201ENST00000505539 926 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.96□□□□□ -2.1
HSPG2P98160 IGKV3-31-201ENST00000523109 329 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AC010306.1-201ENST00000523223 1117 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.96□□□□□ -2.1
HSPG2P98160 AC024153.1-201ENST00000603103 365 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HSPG2P98160 IGHVIII-44-202ENST00000636235 289 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC1.96□□□□□ -2.1
HSPG2P98160 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HSPG2P98160 AC068647.1-201ENST00000489539 2265 ntBASIC1.96□□□□□ -2.1
HSPG2P98160 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms