Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RPS28P62857 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RPS28P62857 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 TAS2R15P-201ENST00000390674 928 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RNU1-82P-201ENST00000390851 165 ntBASIC2.07□□□□□ -2.08
RPS28P62857 GCNT1P4-201ENST00000404096 329 ntBASIC2.07□□□□□ -2.08
RPS28P62857 MIR1303-201ENST00000408625 86 ntBASIC2.07□□□□□ -2.08
RPS28P62857 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 AC245054.2-201ENST00000415639 319 ntBASIC2.07□□□□□ -2.08
RPS28P62857 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 AC099782.1-201ENST00000425889 474 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RPL23AP82-202ENST00000427528 469 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 AL513175.1-201ENST00000431492 780 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC127537.2-201ENST00000439258 465 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 RPL7P14-201ENST00000449851 741 ntBASIC2.07□□□□□ -2.08
RPS28P62857 OR51B8P-201ENST00000449892 769 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 CENPBD1P1-201ENST00000464061 469 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RPL27AP5-201ENST00000469428 449 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RPL9P33-201ENST00000484311 566 ntBASIC2.07□□□□□ -2.08
RPS28P62857 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 AC093763.2-201ENST00000505334 1223 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 RNU1-143P-201ENST00000516296 146 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.07□□□□□ -2.08
RPS28P62857 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 ELOCP31-201ENST00000540463 467 ntBASIC2.07□□□□□ -2.08
RPS28P62857 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.07□□□□□ -2.08
RPS28P62857 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.07□□□□□ -2.08
RPS28P62857 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 AP005205.1-201ENST00000563503 508 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 BGLT3-201ENST00000564523 994 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.07□□□□□ -2.08
RPS28P62857 AC090666.1-201ENST00000578241 445 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 MIR5694-201ENST00000581190 76 ntBASIC2.07□□□□□ -2.08
RPS28P62857 MIR3605-201ENST00000583214 100 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 AL137849.1-201ENST00000604767 169 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC110792.4-201ENST00000609843 298 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AP000894.4-201ENST00000610185 483 ntBASIC2.07□□□□□ -2.08
RPS28P62857 U1.23-201ENST00000610293 146 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC007497.1-201ENST00000610421 561 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AL121782.1-201ENST00000611242 413 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AC011890.2-201ENST00000613393 294 ntBASIC2.07□□□□□ -2.08
RPS28P62857 uc_338.25-201ENST00000613756 156 ntBASIC2.07□□□□□ -2.08
RPS28P62857 RNU1-68P-201ENST00000615382 146 ntBASIC2.07□□□□□ -2.08
RPS28P62857 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPS28P62857 U1.39-201ENST00000621562 146 ntBASIC2.07□□□□□ -2.08
RPS28P62857 AL356490.1-201ENST00000623079 479 ntBASIC2.07□□□□□ -2.08
RPS28P62857 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.07□□□□□ -2.08
RPS28P62857 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.06□□□□□ -2.08
RPS28P62857 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPS28P62857 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPS28P62857 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPS28P62857 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RPS28P62857 AL139276.1-201ENST00000311910 1001 ntBASIC2.06□□□□□ -2.08
RPS28P62857 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPS28P62857 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPS28P62857 RNA5SP110-201ENST00000362638 115 ntBASIC2.06□□□□□ -2.08
RPS28P62857 RNU6-1249P-201ENST00000363237 111 ntBASIC2.06□□□□□ -2.08
RPS28P62857 RNU5D-1-201ENST00000363299 116 ntBASIC2.06□□□□□ -2.08
RPS28P62857 SNORA25.6-201ENST00000364121 118 ntBASIC2.06□□□□□ -2.08
RPS28P62857 MIR144-201ENST00000384886 86 ntBASIC2.06□□□□□ -2.08
RPS28P62857 EEF1GP6-201ENST00000402309 905 ntBASIC2.06□□□□□ -2.08
RPS28P62857 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.06□□□□□ -2.08
RPS28P62857 AC114755.2-201ENST00000413520 361 ntBASIC2.06□□□□□ -2.08
RPS28P62857 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC2.06□□□□□ -2.08
RPS28P62857 RPL7P30-201ENST00000420888 709 ntBASIC2.06□□□□□ -2.08
RPS28P62857 AL389915.1-201ENST00000422463 466 ntBASIC2.06□□□□□ -2.08
RPS28P62857 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC2.06□□□□□ -2.08
RPS28P62857 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.06□□□□□ -2.08
RPS28P62857 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.06□□□□□ -2.08
RPS28P62857 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 RPL7P29-201ENST00000437151 728 ntBASIC2.06□□□□□ -2.08
RPS28P62857 CICP10-201ENST00000439497 198 ntBASIC2.06□□□□□ -2.08
RPS28P62857 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.06□□□□□ -2.08
RPS28P62857 AL357552.1-201ENST00000445254 415 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms