Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM3P62310 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LSM3P62310 AL161713.1-201ENST00000555538 145 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AC051619.2-201ENST00000559063 397 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.83□□□□□ -1.96
LSM3P62310 MIR4310-201ENST00000582950 57 ntBASIC2.83□□□□□ -1.96
LSM3P62310 MIR4512-201ENST00000583257 77 ntBASIC2.83□□□□□ -1.96
LSM3P62310 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM3P62310 AC234771.5-201ENST00000600161 514 ntBASIC2.83□□□□□ -1.96
LSM3P62310 AL589935.2-201ENST00000616471 1231 ntBASIC2.83□□□□□ -1.96
LSM3P62310 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM3P62310 HSPA8P19-201ENST00000505359 1517 ntBASIC2.83□□□□□ -1.96
LSM3P62310 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM3P62310 AC017002.4-201ENST00000604721 1525 ntBASIC2.83□□□□□ -1.96
LSM3P62310 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 SPRR2C-201ENST00000290702 219 ntBASIC2.82□□□□□ -1.96
LSM3P62310 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 AC007066.1-201ENST00000392902 381 ntBASIC2.82□□□□□ -1.96
LSM3P62310 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LSM3P62310 AL034374.1-201ENST00000406329 351 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM3P62310 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 TRIAP1P1-201ENST00000427062 225 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM3P62310 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM3P62310 RPL36AP33-201ENST00000450395 310 ntBASIC2.82□□□□□ -1.96
LSM3P62310 RPS20P21-201ENST00000466859 343 ntBASIC2.82□□□□□ -1.96
LSM3P62310 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 RPL7P5-201ENST00000471472 736 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AC025518.1-201ENST00000479856 347 ntBASIC2.82□□□□□ -1.96
LSM3P62310 GAPDHP36-201ENST00000480688 918 ntBASIC2.82□□□□□ -1.96
LSM3P62310 RN7SL459P-201ENST00000481078 302 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM3P62310 AP001086.1-201ENST00000494882 321 ntBASIC2.82□□□□□ -1.96
LSM3P62310 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.82□□□□□ -1.96
LSM3P62310 AC008638.1-201ENST00000506035 866 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.82□□□□□ -1.96
LSM3P62310 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
LSM3P62310 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 AC234775.3-201ENST00000564612 656 ntBASIC2.82□□□□□ -1.96
LSM3P62310 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.82□□□□□ -1.96
LSM3P62310 AC053481.4-201ENST00000583164 216 ntBASIC2.82□□□□□ -1.96
LSM3P62310 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 AC010680.4-201ENST00000605334 543 ntBASIC2.82□□□□□ -1.96
LSM3P62310 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 AL139811.1-201ENST00000424779 2299 ntBASIC2.82□□□□□ -1.96
LSM3P62310 GABPAP-201ENST00000419271 1356 ntBASIC2.82□□□□□ -1.96
LSM3P62310 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
LSM3P62310 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.82□□□□□ -1.96
LSM3P62310 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LSM3P62310 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 MT-TP-201ENST00000387461 68 ntBASIC2.81□□□□□ -1.96
LSM3P62310 SNORA48.8-201ENST00000391324 134 ntBASIC2.81□□□□□ -1.96
LSM3P62310 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.81□□□□□ -1.96
LSM3P62310 ATP5A1P2-201ENST00000412323 255 ntBASIC2.81□□□□□ -1.96
LSM3P62310 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 AC093084.1-201ENST00000424233 687 ntBASIC2.81□□□□□ -1.96
LSM3P62310 RPL30P3-201ENST00000424262 333 ntBASIC2.81□□□□□ -1.96
LSM3P62310 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM3P62310 MTCO3P21-201ENST00000430791 643 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AL353705.1-201ENST00000433468 480 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AL138799.3-201ENST00000438968 350 ntBASIC2.81□□□□□ -1.96
LSM3P62310 CCRL1P1-201ENST00000449542 1053 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC016724.1-201ENST00000453215 421 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.81□□□□□ -1.96
LSM3P62310 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 AC092451.1-201ENST00000480211 153 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 UBE2CP3-201ENST00000502715 450 ntBASIC2.81□□□□□ -1.96
LSM3P62310 FCF1P8-201ENST00000510322 597 ntBASIC2.81□□□□□ -1.96
LSM3P62310 RN7SKP141-201ENST00000516167 338 ntBASIC2.81□□□□□ -1.96
LSM3P62310 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.81□□□□□ -1.96
LSM3P62310 AC034236.3-201ENST00000605999 461 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AL627309.6-201ENST00000606857 840 ntBASIC2.81□□□□□ -1.96
LSM3P62310 U3.45-201ENST00000607547 219 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC069234.5-201ENST00000611056 416 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC019176.2-201ENST00000611579 315 ntBASIC2.81□□□□□ -1.96
LSM3P62310 MIR8058-201ENST00000615737 89 ntBASIC2.81□□□□□ -1.96
LSM3P62310 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 MIR6875-201ENST00000617506 72 ntBASIC2.81□□□□□ -1.96
LSM3P62310 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.81□□□□□ -1.96
LSM3P62310 DCAF13P1-201ENST00000495256 1330 ntBASIC2.81□□□□□ -1.96
LSM3P62310 AC138915.3-201ENST00000562908 1389 ntBASIC2.81□□□□□ -1.96
LSM3P62310 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LSM3P62310 AC110792.3-201ENST00000595906 1614 ntBASIC2.81□□□□□ -1.96
LSM3P62310 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms