Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPL6P29-201ENST00000414863 865 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AL049610.1-201ENST00000423374 372 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 OR5BE1P-201ENST00000425977 939 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A1P61619 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A1P61619 KATNBL1P6-201ENST00000453433 915 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC006511.1-201ENST00000470614 315 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 SETP14-201ENST00000497538 873 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AF213884.2-201ENST00000510417 903 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AC022447.1-201ENST00000515358 464 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 RNU2-30P-201ENST00000516209 141 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 RNU6-678P-201ENST00000516832 109 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A1P61619 EDDM3DP-201ENST00000554692 434 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AC087477.6-201ENST00000559595 843 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC007599.1-201ENST00000568688 1174 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AP001094.1-201ENST00000579805 193 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 OR4K7P-201ENST00000580232 945 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AL390816.3-201ENST00000604527 1066 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AL008729.2-201ENST00000606393 473 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A1P61619 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 OR5BE1P-202ENST00000641168 1176 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A1P61619 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A1P61619 ASNSP1-204ENST00000641977 1664 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A1P61619 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEC61A1P61619 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A1P61619 AC009643.2-201ENST00000603543 1448 ntBASIC4.12□□□□□ -1.75
SEC61A1P61619 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 KARSP3-201ENST00000571212 1504 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 AL592182.3-201ENST00000642132 3304 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC016716.1-201ENST00000265882 708 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEC61A1P61619 U3.4-201ENST00000363352 213 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 Y_RNA.311-201ENST00000365068 96 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RNU6-619P-201ENST00000365146 108 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEC61A1P61619 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEC61A1P61619 VDAC2P1-201ENST00000399358 958 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RPL37P18-201ENST00000411602 243 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 RPS3AP44-201ENST00000425466 790 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 Z93242.1-201ENST00000427102 353 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AL590103.1-201ENST00000434488 307 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.11□□□□□ -1.75
SEC61A1P61619 RPS25P9-201ENST00000435591 252 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC004938.1-201ENST00000438468 308 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.11□□□□□ -1.75
SEC61A1P61619 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC010733.1-201ENST00000451515 401 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RPL37P3-201ENST00000456825 293 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC006967.1-201ENST00000467608 589 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RPL7P1-201ENST00000468161 747 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RPL7P9-201ENST00000468715 747 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 RPS26P28-201ENST00000470806 348 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 RPL23AP65-201ENST00000475608 468 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC072039.1-201ENST00000477611 581 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 OR51K1P-201ENST00000510214 950 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 LTV1P1-201ENST00000510683 1237 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 RN7SKP31-201ENST00000516354 278 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC007954.1-201ENST00000554198 494 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms