Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC073387.2-201ENST00000604797 784 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 AL627309.6-201ENST00000606857 840 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 AL354760.1-201ENST00000608357 643 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 AC091046.2-201ENST00000620775 665 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 RPL23AP61-201ENST00000623642 466 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 AC015726.3-201ENST00000624501 418 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CKS1BP61024 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CKS1BP61024 AL356274.2-201ENST00000624379 3752 ntBASIC2.6□□□□□ -1.99
CKS1BP61024 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
CKS1BP61024 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.6□□□□□ -1.99
CKS1BP61024 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CKS1BP61024 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CKS1BP61024 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.59□□□□□ -1.99
CKS1BP61024 RNA5SP383-201ENST00000362934 120 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RNA5SP443-201ENST00000363083 132 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CKS1BP61024 RPS26P8-201ENST00000393490 348 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RPS4XP9-201ENST00000405151 780 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RN7SKP278-201ENST00000410504 342 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RNA5SP498-201ENST00000411342 120 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 BMS1P22-201ENST00000414726 313 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AL158071.1-201ENST00000430315 461 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.59□□□□□ -1.99
CKS1BP61024 CBX1P1-201ENST00000440184 427 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 UBE2V2P4-201ENST00000447495 259 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AC146507.2-201ENST00000460608 476 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 UQCRHP4-201ENST00000471686 272 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CKS1BP61024 TRBV12-2-201ENST00000489763 344 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AC110792.1-201ENST00000491826 472 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AL132838.2-201ENST00000492041 314 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 RPL7P24-201ENST00000493052 752 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.59□□□□□ -1.99
CKS1BP61024 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.59□□□□□ -1.99
CKS1BP61024 AC010285.3-201ENST00000511668 676 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.59□□□□□ -1.99
CKS1BP61024 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CKS1BP61024 CYCSP29-201ENST00000533731 318 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AC004024.1-201ENST00000549244 247 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.59□□□□□ -1.99
CKS1BP61024 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 AC115085.1-201ENST00000588924 229 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.59□□□□□ -1.99
CKS1BP61024 MIR6868-201ENST00000611215 58 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CKS1BP61024 MIR8059-201ENST00000620427 81 ntBASIC2.59□□□□□ -1.99
CKS1BP61024 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.59□□□□□ -1.99
CKS1BP61024 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.59□□□□□ -2
CKS1BP61024 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CKS1BP61024 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
CKS1BP61024 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CKS1BP61024 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKS1BP61024 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.58□□□□□ -2
CKS1BP61024 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CKS1BP61024 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.58□□□□□ -2
CKS1BP61024 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CKS1BP61024 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.58□□□□□ -2
CKS1BP61024 RNA5SP399-201ENST00000364003 117 ntBASIC2.58□□□□□ -2
CKS1BP61024 RNU6-1251P-201ENST00000364502 107 ntBASIC2.58□□□□□ -2
CKS1BP61024 RNA5SP509-201ENST00000364577 119 ntBASIC2.58□□□□□ -2
CKS1BP61024 RNA5SP505-201ENST00000364748 108 ntBASIC2.58□□□□□ -2
CKS1BP61024 SNORA51.4-201ENST00000364993 124 ntBASIC2.58□□□□□ -2
CKS1BP61024 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.58□□□□□ -2
CKS1BP61024 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.58□□□□□ -2
CKS1BP61024 RPL21P75-201ENST00000396599 483 ntBASIC2.58□□□□□ -2
CKS1BP61024 RPL21P28-201ENST00000401418 483 ntBASIC2.58□□□□□ -2
CKS1BP61024 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
CKS1BP61024 ZNF602P-201ENST00000405929 924 ntBASIC2.58□□□□□ -2
CKS1BP61024 RNU6-1077P-201ENST00000410506 102 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC109780.2-201ENST00000413467 845 ntBASIC2.58□□□□□ -2
CKS1BP61024 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.58□□□□□ -2
CKS1BP61024 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.58□□□□□ -2
CKS1BP61024 AC010740.1-201ENST00000417035 684 ntBASIC2.58□□□□□ -2
CKS1BP61024 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.58□□□□□ -2
CKS1BP61024 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.58□□□□□ -2
CKS1BP61024 AC009480.2-201ENST00000422916 432 ntBASIC2.58□□□□□ -2
CKS1BP61024 USP9YP36-201ENST00000424581 829 ntBASIC2.58□□□□□ -2
CKS1BP61024 HIGD1AP12-201ENST00000427832 281 ntBASIC2.58□□□□□ -2
CKS1BP61024 DNAJC19P7-201ENST00000428811 344 ntBASIC2.58□□□□□ -2
CKS1BP61024 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.58□□□□□ -2
CKS1BP61024 AL138878.2-201ENST00000440581 1241 ntBASIC2.58□□□□□ -2
CKS1BP61024 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.58□□□□□ -2
CKS1BP61024 RPS17P13-201ENST00000448974 407 ntBASIC2.58□□□□□ -2
CKS1BP61024 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKS1BP61024 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC011276.1-201ENST00000469688 323 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC011979.1-201ENST00000472300 483 ntBASIC2.58□□□□□ -2
CKS1BP61024 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
CKS1BP61024 RPS3AP6-201ENST00000484430 795 ntBASIC2.58□□□□□ -2
CKS1BP61024 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms