Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 CASC19-261ENST00000641853 1638 ntBASIC3.22□□□□□ -1.89
ACTBP60709 MFSD8-236ENST00000641509 4050 ntBASIC3.22□□□□□ -1.89
ACTBP60709 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ACTBP60709 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 RNU6-600P-201ENST00000362524 99 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RNU6-185P-201ENST00000384421 107 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AL136116.1-201ENST00000403591 381 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RNU2-71P-201ENST00000411395 189 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RPL26P37-201ENST00000411983 438 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC105402.1-201ENST00000413336 545 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RPL31P12-201ENST00000422587 358 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 OSTCP5-201ENST00000425293 453 ntBASIC3.21□□□□□ -1.9
ACTBP60709 MTCO1P45-201ENST00000431457 267 ntBASIC3.21□□□□□ -1.9
ACTBP60709 MRPS18BP2-201ENST00000434310 759 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AL356276.2-201ENST00000435919 558 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 RPL21P133-201ENST00000443666 476 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 RPS11P1-201ENST00000451072 473 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RPL12P26-201ENST00000452430 487 ntBASIC3.21□□□□□ -1.9
ACTBP60709 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 RPL5P24-201ENST00000463742 885 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RPS27AP1-201ENST00000475545 471 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC012181.1-201ENST00000479895 423 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 RNA5SP164-201ENST00000516533 110 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RNU6-1308P-201ENST00000516817 103 ntBASIC3.21□□□□□ -1.9
ACTBP60709 RNA5SP179-201ENST00000517284 121 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.21□□□□□ -1.9
ACTBP60709 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 AC010198.2-201ENST00000550612 259 ntBASIC3.21□□□□□ -1.9
ACTBP60709 OR4T1P-201ENST00000554933 911 ntBASIC3.21□□□□□ -1.9
ACTBP60709 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.21□□□□□ -1.9
ACTBP60709 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.21□□□□□ -1.9
ACTBP60709 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
ACTBP60709 AC091167.4-201ENST00000605079 184 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AL591034.3-201ENST00000605511 685 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC113194.1-201ENST00000606037 500 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC016877.3-201ENST00000606778 504 ntBASIC3.21□□□□□ -1.9
ACTBP60709 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.21□□□□□ -1.9
ACTBP60709 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 AC112484.5-201ENST00000624189 228 ntBASIC3.21□□□□□ -1.9
ACTBP60709 AC019080.5-201ENST00000624891 757 ntBASIC3.21□□□□□ -1.9
ACTBP60709 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
ACTBP60709 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.9
ACTBP60709 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.21□□□□□ -1.9
ACTBP60709 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACTBP60709 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.21□□□□□ -1.9
ACTBP60709 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ACTBP60709 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ACTBP60709 AL049737.1-201ENST00000413920 1403 ntBASIC3.2□□□□□ -1.9
ACTBP60709 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.2□□□□□ -1.9
ACTBP60709 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ACTBP60709 RN7SKP227-201ENST00000364445 330 ntBASIC3.2□□□□□ -1.9
ACTBP60709 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
ACTBP60709 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 GSTA12P-201ENST00000402398 508 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AL590704.1-201ENST00000402856 794 ntBASIC3.2□□□□□ -1.9
ACTBP60709 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.2□□□□□ -1.9
ACTBP60709 HMGB3P20-201ENST00000417997 600 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AL691447.1-201ENST00000419456 387 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ACTBP60709 RPL17P36-201ENST00000420302 549 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 AL691449.1-201ENST00000426570 421 ntBASIC3.2□□□□□ -1.9
ACTBP60709 PSMA2P3-201ENST00000429685 675 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AL158071.1-201ENST00000430315 461 ntBASIC3.2□□□□□ -1.9
ACTBP60709 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 AC023512.1-201ENST00000444513 499 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC114755.5-201ENST00000447760 831 ntBASIC3.2□□□□□ -1.9
ACTBP60709 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC110792.1-201ENST00000491826 472 ntBASIC3.2□□□□□ -1.9
ACTBP60709 HMGB3P15-201ENST00000507326 574 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 RNA5SP208-201ENST00000516156 78 ntBASIC3.2□□□□□ -1.9
ACTBP60709 IGKV2D-19-201ENST00000523346 262 ntBASIC3.2□□□□□ -1.9
ACTBP60709 OR4R3P-201ENST00000525084 838 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.2□□□□□ -1.9
ACTBP60709 AL121766.1-201ENST00000547436 487 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms