Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 AC006463.2-201ENST00000473326 348 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 RPS4XP22-201ENST00000480755 780 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 AC020893.1-201ENST00000502452 580 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN12P56749 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN12P56749 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN12P56749 AC147055.1-201ENST00000509261 750 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN12P56749 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN12P56749 AL121594.4-201ENST00000556211 1196 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 MIR3939-201ENST00000582614 106 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 AC112230.1-201ENST00000604342 547 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 AC011816.2-201ENST00000607089 556 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 AL732618.1-201ENST00000623251 301 ntBASIC3.11□□□□□ -1.91
CLDN12P56749 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN12P56749 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN12P56749 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN12P56749 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CLDN12P56749 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN12P56749 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CLDN12P56749 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 ZNF602P-201ENST00000405929 924 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AP000567.1-201ENST00000406413 156 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 RNU2-21P-201ENST00000410368 188 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 NUP35P2-201ENST00000416748 943 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AC068533.1-201ENST00000418542 415 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 OSTCP5-201ENST00000425293 453 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN12P56749 HMGB1P12-201ENST00000438594 598 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 AC010655.1-201ENST00000449336 292 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 TPT1P13-201ENST00000449760 499 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 RPS4XP2-201ENST00000458402 793 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 AL035404.1-201ENST00000497982 568 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 AC111193.1-201ENST00000504097 155 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN12P56749 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 HIGD1AP10-201ENST00000527837 282 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 POLR2KP1-201ENST00000553226 168 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN12P56749 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN12P56749 AC005156.1-201ENST00000613371 573 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AC018816.2-201ENST00000621460 353 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 AC112484.5-201ENST00000624189 228 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 OR52H1-202ENST00000641796 1061 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 AC005183.1-201ENST00000603687 1979 ntBASIC3.1□□□□□ -1.91
CLDN12P56749 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN12P56749 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN12P56749 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN12P56749 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 AC092326.2-201ENST00000624772 1561 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 RNU6-819P-201ENST00000364116 107 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 RPL7P60-201ENST00000397636 735 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 RPS4XP9-201ENST00000405151 780 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN12P56749 RNU6-564P-201ENST00000410983 104 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN12P56749 RPL26P29-201ENST00000415623 438 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 MTND2P16-201ENST00000419987 799 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 RNF19BPX-201ENST00000426224 625 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms