Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP000255.1-201ENST00000610276 676 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AL121873.1-201ENST00000616013 524 ntBASIC3.99□□□□□ -1.77
CDH11P55287 AC231759.1-201ENST00000616455 597 ntBASIC3.99□□□□□ -1.77
CDH11P55287 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH11P55287 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
CDH11P55287 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH11P55287 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH11P55287 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 ASNSP1-201ENST00000518311 1939 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC021146.4-201ENST00000309229 279 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC126755.2-208ENST00000327792 462 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC138969.1-213ENST00000331436 462 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RNU6-560P-201ENST00000364007 108 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AL049693.1-201ENST00000402760 611 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RNU6-272P-201ENST00000411028 104 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 ELOCP19-201ENST00000411919 318 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AL008987.1-201ENST00000415528 237 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 AC007435.1-201ENST00000421086 415 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC009237.2-201ENST00000421358 284 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC010099.3-201ENST00000423896 409 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RPL12P34-201ENST00000424532 479 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.98□□□□□ -1.77
CDH11P55287 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH11P55287 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 AC091390.1-201ENST00000433904 331 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH11P55287 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 AC073143.1-201ENST00000436316 395 ntBASIC3.98□□□□□ -1.77
CDH11P55287 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.98□□□□□ -1.77
CDH11P55287 MTCYBP31-201ENST00000438855 1122 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RPL23AP93-201ENST00000440847 484 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC004865.1-201ENST00000442276 1003 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RPL21P133-201ENST00000443666 476 ntBASIC3.98□□□□□ -1.77
CDH11P55287 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 VN1R40P-201ENST00000455196 941 ntBASIC3.98□□□□□ -1.77
CDH11P55287 APOOP2-201ENST00000461561 539 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RPS23P7-201ENST00000466210 444 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC006511.1-201ENST00000470614 315 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RPL23AP2-201ENST00000471227 466 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC004263.1-201ENST00000479327 332 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 AC034244.1-201ENST00000507687 207 ntBASIC3.98□□□□□ -1.77
CDH11P55287 KRT19P6-201ENST00000510983 209 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC008837.2-201ENST00000513076 418 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 IGLVIV-65-201ENST00000517313 360 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH11P55287 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
CDH11P55287 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
CDH11P55287 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 AC124068.1-201ENST00000563131 678 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC009094.1-201ENST00000564443 426 ntBASIC3.98□□□□□ -1.77
CDH11P55287 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH11P55287 AC091488.1-201ENST00000604239 660 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC092954.1-201ENST00000609121 445 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC026368.1-201ENST00000614934 690 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC083809.1-201ENST00000615051 472 ntBASIC3.98□□□□□ -1.77
CDH11P55287 AC006338.2-201ENST00000616864 791 ntBASIC3.98□□□□□ -1.77
CDH11P55287 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 AC125257.1-201ENST00000560400 2930 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH11P55287 AC090971.4-201ENST00000560291 1800 ntBASIC3.98□□□□□ -1.77
CDH11P55287 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH11P55287 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH11P55287 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 HMGB1P5-201ENST00000255320 642 ntBASIC3.97□□□□□ -1.77
CDH11P55287 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 NACA3P-201ENST00000359690 648 ntBASIC3.97□□□□□ -1.77
CDH11P55287 SNORD74.4-201ENST00000364129 80 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms