Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.23□□□□□ -1.73
LHX1P48742 AC091057.3-201ENST00000602684 733 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC096947.1-201ENST00000603233 470 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC002487.1-201ENST00000604565 994 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC090912.3-201ENST00000609775 533 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC090772.4-201ENST00000623599 362 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC124312.6-202ENST00000623624 418 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AL109659.3-201ENST00000624985 950 ntBASIC4.23□□□□□ -1.73
LHX1P48742 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LHX1P48742 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 AC111188.2-201ENST00000529697 1387 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AC025263.3-201ENST00000622965 1396 ntBASIC4.23□□□□□ -1.73
LHX1P48742 AP002001.2-201ENST00000529025 1469 ntBASIC4.23□□□□□ -1.73
LHX1P48742 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LHX1P48742 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
LHX1P48742 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LHX1P48742 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LHX1P48742 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LHX1P48742 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.22□□□□□ -1.73
LHX1P48742 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
LHX1P48742 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LHX1P48742 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LHX1P48742 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LHX1P48742 RNU6-272P-201ENST00000411028 104 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 VDAC1P6-201ENST00000430062 855 ntBASIC4.22□□□□□ -1.73
LHX1P48742 KCTD10P1-201ENST00000434203 625 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 PTGES3P1-201ENST00000439531 483 ntBASIC4.22□□□□□ -1.73
LHX1P48742 HMGB1P48-201ENST00000446155 598 ntBASIC4.22□□□□□ -1.73
LHX1P48742 RPL21P11-201ENST00000461458 483 ntBASIC4.22□□□□□ -1.73
LHX1P48742 NAP1L1P3-201ENST00000462291 880 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AC104164.3-201ENST00000467363 1258 ntBASIC4.22□□□□□ -1.73
LHX1P48742 PRDX3P4-201ENST00000470828 747 ntBASIC4.22□□□□□ -1.73
LHX1P48742 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.22□□□□□ -1.73
LHX1P48742 AC011037.1-201ENST00000483964 558 ntBASIC4.22□□□□□ -1.73
LHX1P48742 RPS27P23-201ENST00000487608 251 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AC096571.1-202ENST00000506634 735 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 NPM1P41-201ENST00000512920 831 ntBASIC4.22□□□□□ -1.73
LHX1P48742 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.22□□□□□ -1.73
LHX1P48742 NDUFA5P2-201ENST00000519723 344 ntBASIC4.22□□□□□ -1.73
LHX1P48742 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LHX1P48742 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.22□□□□□ -1.73
LHX1P48742 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.22□□□□□ -1.73
LHX1P48742 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.22□□□□□ -1.73
LHX1P48742 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.22□□□□□ -1.73
LHX1P48742 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.22□□□□□ -1.73
LHX1P48742 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LHX1P48742 AP001542.2-201ENST00000593141 364 ntBASIC4.22□□□□□ -1.73
LHX1P48742 RPAP2P1-201ENST00000603626 1168 ntBASIC4.22□□□□□ -1.73
LHX1P48742 AL451086.1-201ENST00000605596 223 ntBASIC4.22□□□□□ -1.73
LHX1P48742 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LHX1P48742 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LHX1P48742 MTND4P26-201ENST00000415971 1359 ntBASIC4.22□□□□□ -1.73
LHX1P48742 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
LHX1P48742 AC138393.1-206ENST00000540997 1886 ntBASIC4.22□□□□□ -1.73
LHX1P48742 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LHX1P48742 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.21□□□□□ -1.73
LHX1P48742 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
LHX1P48742 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.21□□□□□ -1.74
LHX1P48742 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 ANKRD36P1-201ENST00000344424 659 ntBASIC4.21□□□□□ -1.74
LHX1P48742 RNA5SP97-201ENST00000365006 84 ntBASIC4.21□□□□□ -1.74
LHX1P48742 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 OR2X1P-201ENST00000421144 687 ntBASIC4.21□□□□□ -1.74
LHX1P48742 MTCO1P54-201ENST00000430139 712 ntBASIC4.21□□□□□ -1.74
LHX1P48742 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX1P48742 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
LHX1P48742 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.21□□□□□ -1.74
LHX1P48742 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX1P48742 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LHX1P48742 RPL23AP2-201ENST00000471227 466 ntBASIC4.21□□□□□ -1.74
LHX1P48742 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
LHX1P48742 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.21□□□□□ -1.74
LHX1P48742 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 AC091163.3-201ENST00000518269 1144 ntBASIC4.21□□□□□ -1.74
LHX1P48742 LRRC6P1-201ENST00000532188 885 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms