Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 RN7SL93P-201ENST00000463035 293 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 CABYRP1-201ENST00000465493 1045 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC010307.1-201ENST00000467206 836 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC093663.2-201ENST00000484625 313 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AL139099.1-201ENST00000497398 403 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 RNA5SP208-201ENST00000516156 78 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 IGKV2-23-201ENST00000518729 323 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 CBX3P2-202ENST00000583365 535 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 BRDTP1-201ENST00000605735 677 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC005344.1-201ENST00000613391 459 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AL354798.1-201ENST00000622505 329 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 FP236240.3-201ENST00000623061 327 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 AC068724.3-201ENST00000625906 87 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 FAM157B-203ENST00000639350 358 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.37□□□□□ -1.87
CSNK1A1P48729 RPS4XP5-202ENST00000449995 1334 ntBASIC3.37□□□□□ -1.87
CSNK1A1P48729 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSNK1A1P48729 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSNK1A1P48729 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 USP8P1-201ENST00000494673 3183 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL592494.2-201ENST00000425455 1548 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 SNORA31-201ENST00000362607 130 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 RNA5SP189-201ENST00000364920 115 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 U1.1-201ENST00000384101 164 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL356057.1-202ENST00000402263 756 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 RNU2-37P-201ENST00000410695 177 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 ARL2BPP3-201ENST00000421226 480 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 MORF4L1P7-201ENST00000426038 703 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL390879.2-203ENST00000426943 1121 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 FAR1P1-201ENST00000427163 934 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 RPL7P2-201ENST00000427639 268 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 HIGD1AP12-201ENST00000427832 281 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 IFNNP1-201ENST00000429219 553 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 MTND2P6-201ENST00000455337 1030 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC089999.1-201ENST00000460336 374 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC103987.1-201ENST00000473394 348 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC092451.1-201ENST00000480211 153 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC068587.1-201ENST00000483613 781 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 TMEM248P1-201ENST00000510579 951 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 RAC1P2-201ENST00000511164 579 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 OR6C73P-201ENST00000546432 358 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC067959.1-201ENST00000604334 379 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC090912.3-201ENST00000609775 533 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC016717.3-201ENST00000624730 554 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 LINC00561-201ENST00000565815 2738 ntBASIC3.36□□□□□ -1.87
CSNK1A1P48729 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CSNK1A1P48729 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSNK1A1P48729 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AP004289.2-201ENST00000444413 1457 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 MTCO1P24-201ENST00000515438 1558 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 RNU6-98P-201ENST00000384173 107 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 MIR30B-201ENST00000384850 88 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 HSPE1P8-201ENST00000406997 288 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 TCEA1P4-201ENST00000415066 844 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms