Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC024933.1-201ENST00000608472 348 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXD13P35453 AL136295.6-201ENST00000610486 658 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 AC104763.3-201ENST00000613765 618 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXD13P35453 AC022960.3-201ENST00000619794 441 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 AL157770.1-201ENST00000623049 439 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXD13P35453 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
HOXD13P35453 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXD13P35453 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD13P35453 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXD13P35453 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXD13P35453 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
HOXD13P35453 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MARK2P15-201ENST00000432204 2186 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 AL022322.2-201ENST00000624072 20397 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 RNU6-582P-201ENST00000362989 107 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 OSTCP5-201ENST00000425293 453 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MTCO1P3-201ENST00000429327 192 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 VDAC1P6-201ENST00000430062 855 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 HMGB3P6-201ENST00000444896 598 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXD13P35453 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 S100A11P1-201ENST00000477525 312 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 RPL21P131-201ENST00000497298 483 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXD13P35453 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 AC093752.1-206ENST00000511823 336 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MYL12AP1-201ENST00000518490 515 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXD13P35453 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 LSM6P2-201ENST00000552208 177 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXD13P35453 MIR4509-3-201ENST00000578671 94 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MIR5708-201ENST00000579723 85 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 AC023575.1-201ENST00000580510 358 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MIR4509-2-201ENST00000583920 94 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 HSPE1P14-201ENST00000605812 302 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 PART1_2.1-201ENST00000612397 250 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MIR4509-1-201ENST00000618224 94 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 AC068722.2-201ENST00000618734 544 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 MIR7702-201ENST00000621931 59 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 MFSD8-245ENST00000641743 948 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 AC116667.1-201ENST00000604855 2072 ntBASIC4.53□□□□□ -1.68
HOXD13P35453 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXD13P35453 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXD13P35453 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXD13P35453 AC005261.4-201ENST00000600047 1385 ntBASIC4.53□□□□□ -1.69
HOXD13P35453 AL356489.2-201ENST00000566968 3528 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD13P35453 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD13P35453 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXD13P35453 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXD13P35453 RPL32P3-201ENST00000359025 275 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 RNU6-1066P-201ENST00000363573 105 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 SNORD116-23-201ENST00000384645 92 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 MIR649-201ENST00000384843 97 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 MIR708-201ENST00000390708 88 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AL133264.1-201ENST00000407157 562 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC016397.1-201ENST00000412463 242 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 RPL31P2-201ENST00000413849 377 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD13P35453 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD13P35453 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 HMGB1P16-201ENST00000447155 540 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD13P35453 BOLA3P3-201ENST00000505182 232 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD13P35453 RNU6-885P-201ENST00000516607 104 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC092747.2-201ENST00000545069 983 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXD13P35453 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC079171.1-201ENST00000568788 914 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms