Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA9P31269 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA9P31269 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA9P31269 AC090337.1-201ENST00000579651 2074 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 RNU6-618P-201ENST00000363518 112 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 MIR490-201ENST00000384865 128 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 NPM1P10-201ENST00000398310 865 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 USP12PY-201ENST00000427677 1064 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXA9P31269 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA9P31269 AC010655.1-201ENST00000449336 292 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 MTND3P4-201ENST00000453537 303 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXA9P31269 HSPD1P15-201ENST00000505573 1122 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA9P31269 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA9P31269 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA9P31269 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA9P31269 AL390816.3-201ENST00000604527 1066 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.82□□□□□ -1.8
HOXA9P31269 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA9P31269 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HOXA9P31269 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA9P31269 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA9P31269 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA9P31269 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 ATP5JP1-201ENST00000431631 322 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 ATP5HP2-201ENST00000433885 485 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 AC005019.1-201ENST00000436455 431 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 HMGB1P16-201ENST00000447155 540 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA9P31269 RPL9P32-201ENST00000464118 620 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 RPL23AP12-201ENST00000467573 473 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 RN7SL807P-201ENST00000470923 297 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA9P31269 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXA9P31269 AC117525.1-201ENST00000515228 503 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 RNU6-319P-201ENST00000516025 108 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA9P31269 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA9P31269 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA9P31269 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA9P31269 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 AP003392.5-201ENST00000607857 415 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 MIR486-1-201ENST00000612171 68 ntBASIC3.81□□□□□ -1.8
HOXA9P31269 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA9P31269 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXA9P31269 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA9P31269 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HOXA9P31269 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA9P31269 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA9P31269 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA9P31269 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA9P31269 OR5T3-201ENST00000303059 1023 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 OR52E6-202ENST00000379946 954 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 RNU6-152P-201ENST00000384037 107 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXA9P31269 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 AC009237.5-201ENST00000414271 501 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXA9P31269 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 USP9YP7-201ENST00000436723 430 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA9P31269 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA9P31269 USP9YP32-201ENST00000452432 430 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXA9P31269 AC099563.1-201ENST00000456086 418 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 SNORD108-201ENST00000459332 71 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC008155.2-201ENST00000464337 397 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXA9P31269 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA9P31269 SNX5P1-201ENST00000505757 1041 ntBASIC3.8□□□□□ -1.8
HOXA9P31269 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms