Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LIG1P18858 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LIG1P18858 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LIG1P18858 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.24□□□□□ -1.41
LIG1P18858 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
LIG1P18858 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 AC138915.3-201ENST00000562908 1389 ntBASIC6.23□□□□□ -1.41
LIG1P18858 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 Y_RNA.548-201ENST00000384656 105 ntBASIC6.23□□□□□ -1.41
LIG1P18858 MIR323B-201ENST00000385269 82 ntBASIC6.23□□□□□ -1.41
LIG1P18858 RPS3AP36-201ENST00000398190 775 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AL450338.1-201ENST00000407987 512 ntBASIC6.23□□□□□ -1.41
LIG1P18858 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 AL513185.2-201ENST00000425543 193 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.23□□□□□ -1.41
LIG1P18858 AL358934.1-201ENST00000432346 324 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 AC010493.1-201ENST00000513479 292 ntBASIC6.23□□□□□ -1.41
LIG1P18858 Y_RNA.704-201ENST00000516851 102 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.23□□□□□ -1.41
LIG1P18858 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.23□□□□□ -1.41
LIG1P18858 AC125611.2-201ENST00000551907 647 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AL512360.1-201ENST00000555346 234 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC093591.2-201ENST00000565254 3843 ntBASIC6.23□□□□□ -1.41
LIG1P18858 MRPS21P7-201ENST00000566937 238 ntBASIC6.23□□□□□ -1.41
LIG1P18858 MIR4637-201ENST00000582405 84 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.23□□□□□ -1.41
LIG1P18858 AC073091.2-201ENST00000603205 907 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AP001836.1-201ENST00000604675 523 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC135507.2-201ENST00000612443 309 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC015908.5-201ENST00000623289 343 ntBASIC6.23□□□□□ -1.41
LIG1P18858 AC026634.1-201ENST00000634369 198 ntBASIC6.23□□□□□ -1.41
LIG1P18858 MIR3662-201ENST00000637030 95 ntBASIC6.23□□□□□ -1.41
LIG1P18858 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LIG1P18858 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIG1P18858 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIG1P18858 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 SMG1P6-201ENST00000532337 2930 ntBASIC6.22□□□□□ -1.41
LIG1P18858 IGKV7-3-201ENST00000357453 298 ntBASIC6.22□□□□□ -1.41
LIG1P18858 RNU6-1085P-201ENST00000363576 107 ntBASIC6.22□□□□□ -1.41
LIG1P18858 Y_RNA.356-201ENST00000365475 113 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 RNU6-483P-201ENST00000384088 108 ntBASIC6.22□□□□□ -1.41
LIG1P18858 MIR506-201ENST00000384998 124 ntBASIC6.22□□□□□ -1.41
LIG1P18858 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LIG1P18858 FAT1P1-201ENST00000406588 507 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.22□□□□□ -1.41
LIG1P18858 AMD1P2-201ENST00000412936 992 ntBASIC6.22□□□□□ -1.41
LIG1P18858 BX295541.1-201ENST00000417774 250 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AF228730.4-201ENST00000421457 183 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AL133173.1-201ENST00000423458 397 ntBASIC6.22□□□□□ -1.41
LIG1P18858 HSPD1P12-201ENST00000429127 1069 ntBASIC6.22□□□□□ -1.41
LIG1P18858 ATP5HP2-201ENST00000433885 485 ntBASIC6.22□□□□□ -1.41
LIG1P18858 RPS7P5-201ENST00000441482 581 ntBASIC6.22□□□□□ -1.41
LIG1P18858 MTND4P19-201ENST00000446659 478 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AC073909.1-201ENST00000447112 999 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.22□□□□□ -1.41
LIG1P18858 MTCYBP13-201ENST00000578634 1093 ntBASIC6.22□□□□□ -1.41
LIG1P18858 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 MIR3682-201ENST00000581338 84 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 NRBF2P5-201ENST00000603087 788 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AC104695.2-201ENST00000605056 775 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AC231657.1-201ENST00000624313 397 ntBASIC6.22□□□□□ -1.41
LIG1P18858 AL691477.1-201ENST00000624398 162 ntBASIC6.22□□□□□ -1.41
LIG1P18858 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.22□□□□□ -1.41
LIG1P18858 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIG1P18858 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.22□□□□□ -1.41
LIG1P18858 AL031595.2-201ENST00000624215 19071 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms