Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CFTRP13569 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.39□□□□□ -1.55
CFTRP13569 HMGB3P18-201ENST00000406327 590 ntBASIC5.39□□□□□ -1.55
CFTRP13569 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.39□□□□□ -1.55
CFTRP13569 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.39□□□□□ -1.55
CFTRP13569 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CFTRP13569 AC107934.2-201ENST00000518653 310 ntBASIC5.39□□□□□ -1.55
CFTRP13569 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.39□□□□□ -1.55
CFTRP13569 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.39□□□□□ -1.55
CFTRP13569 EIF5A2P1-201ENST00000564027 460 ntBASIC5.39□□□□□ -1.55
CFTRP13569 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFTRP13569 MTCO1P8-201ENST00000416914 1523 ntBASIC5.39□□□□□ -1.55
CFTRP13569 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.39□□□□□ -1.55
CFTRP13569 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CFTRP13569 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CFTRP13569 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.39□□□□□ -1.55
CFTRP13569 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CFTRP13569 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFTRP13569 U3.12-201ENST00000364498 214 ntBASIC5.39□□□□□ -1.55
CFTRP13569 SNORD67-201ENST00000390833 111 ntBASIC5.39□□□□□ -1.55
CFTRP13569 RPS4XP8-201ENST00000402039 771 ntBASIC5.39□□□□□ -1.55
CFTRP13569 RN7SKP222-201ENST00000410651 315 ntBASIC5.39□□□□□ -1.55
CFTRP13569 RNA5SP104-201ENST00000410989 118 ntBASIC5.39□□□□□ -1.55
CFTRP13569 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.39□□□□□ -1.55
CFTRP13569 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CFTRP13569 ACTG1P13-201ENST00000486987 1043 ntBASIC5.39□□□□□ -1.55
CFTRP13569 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CFTRP13569 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CFTRP13569 uc_338.1-201ENST00000612113 180 ntBASIC5.39□□□□□ -1.55
CFTRP13569 AC139713.2-210ENST00000641741 992 ntBASIC5.39□□□□□ -1.55
CFTRP13569 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CFTRP13569 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
CFTRP13569 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.38□□□□□ -1.55
CFTRP13569 AL445529.1-201ENST00000398713 389 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AL139413.1-201ENST00000421309 217 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AC073069.1-201ENST00000428657 441 ntBASIC5.38□□□□□ -1.55
CFTRP13569 ETF1P3-201ENST00000430422 1160 ntBASIC5.38□□□□□ -1.55
CFTRP13569 FTH1P11-201ENST00000517577 551 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.38□□□□□ -1.55
CFTRP13569 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.38□□□□□ -1.55
CFTRP13569 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.38□□□□□ -1.55
CFTRP13569 AC233702.9-201ENST00000581528 203 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.38□□□□□ -1.55
CFTRP13569 VN1R90P-201ENST00000595717 726 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AL596275.2-204ENST00000641628 552 ntBASIC5.38□□□□□ -1.55
CFTRP13569 AL596275.2-206ENST00000641957 626 ntBASIC5.38□□□□□ -1.55
CFTRP13569 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.38□□□□□ -1.55
CFTRP13569 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
CFTRP13569 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CFTRP13569 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 RPL7L1P13-201ENST00000511702 739 ntBASIC5.37□□□□□ -1.55
CFTRP13569 RNU1-41P-201ENST00000516161 162 ntBASIC5.37□□□□□ -1.55
CFTRP13569 RNU1-48P-201ENST00000516400 162 ntBASIC5.37□□□□□ -1.55
CFTRP13569 AC103783.1-201ENST00000520506 373 ntBASIC5.37□□□□□ -1.55
CFTRP13569 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.37□□□□□ -1.55
CFTRP13569 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.37□□□□□ -1.55
CFTRP13569 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 AL139395.1-201ENST00000603662 160 ntBASIC5.37□□□□□ -1.55
CFTRP13569 TUG1_1.1-201ENST00000610654 145 ntBASIC5.37□□□□□ -1.55
CFTRP13569 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.37□□□□□ -1.55
CFTRP13569 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFTRP13569 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFTRP13569 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
CFTRP13569 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.36□□□□□ -1.55
CFTRP13569 AC090971.4-201ENST00000560291 1800 ntBASIC5.36□□□□□ -1.55
CFTRP13569 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CFTRP13569 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CFTRP13569 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFTRP13569 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.36□□□□□ -1.55
CFTRP13569 AL645937.1-202ENST00000421799 937 ntBASIC5.36□□□□□ -1.55
CFTRP13569 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.36□□□□□ -1.55
CFTRP13569 RPL5P30-201ENST00000465511 891 ntBASIC5.36□□□□□ -1.55
CFTRP13569 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.36□□□□□ -1.55
CFTRP13569 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CFTRP13569 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.36□□□□□ -1.55
CFTRP13569 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.36□□□□□ -1.55
CFTRP13569 AL121576.1-201ENST00000556055 276 ntBASIC5.36□□□□□ -1.55
CFTRP13569 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.36□□□□□ -1.55
CFTRP13569 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CFTRP13569 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CFTRP13569 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.35□□□□□ -1.55
CFTRP13569 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.35□□□□□ -1.55
CFTRP13569 OR2X1P-201ENST00000421144 687 ntBASIC5.35□□□□□ -1.55
CFTRP13569 AL035407.1-201ENST00000429211 571 ntBASIC5.35□□□□□ -1.55
CFTRP13569 RPS24P13-201ENST00000442520 397 ntBASIC5.35□□□□□ -1.55
CFTRP13569 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CFTRP13569 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CFTRP13569 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.35□□□□□ -1.55
CFTRP13569 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.35□□□□□ -1.55
CFTRP13569 uc_338.32-201ENST00000615087 172 ntBASIC5.35□□□□□ -1.55
CFTRP13569 AC231759.1-201ENST00000616455 597 ntBASIC5.35□□□□□ -1.55
CFTRP13569 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.35□□□□□ -1.55
CFTRP13569 AC125336.1-201ENST00000508893 2827 ntBASIC5.35□□□□□ -1.55
CFTRP13569 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CFTRP13569 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.35□□□□□ -1.55
CFTRP13569 AL391417.1-201ENST00000404100 426 ntBASIC5.34□□□□□ -1.55
CFTRP13569 RPL7P8-201ENST00000411964 730 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms