Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC092794.1-201ENST00000612734 582 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 MIR6891-201ENST00000618788 93 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC009509.4-201ENST00000619202 509 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AL359740.1-201ENST00000624340 592 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 MIR3653-201ENST00000625572 110 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC087821.2-201ENST00000637086 450 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AP005435.3-201ENST00000531260 3198 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 DCAF13P3-201ENST00000561147 1334 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 NXPH1-205ENST00000602349 1953 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 MIR1303-201ENST00000408625 86 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 RNA5SP498-201ENST00000411342 120 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 RPL7P8-201ENST00000411964 730 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 PGBD4P8-201ENST00000412993 562 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 MTND1P23-201ENST00000416931 372 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 Z74021.1-201ENST00000423610 407 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 MTCYBP5-201ENST00000423752 1135 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 RPL23AP25-201ENST00000430973 463 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 GTF2IP7-202ENST00000436677 309 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC091167.1-201ENST00000492017 396 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 RN7SL812P-201ENST00000493791 279 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 LTV1P1-201ENST00000510683 1237 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC010587.2-201ENST00000511727 448 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 RN7SKP21-201ENST00000516503 220 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 CYCSP29-201ENST00000533731 318 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AL512347.1-201ENST00000566420 503 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 AC012414.6-201ENST00000568241 401 ntBASIC5.24□□□□□ -1.57
HLA-DOAP06340 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DOAP06340 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DOAP06340 AL672167.1-204ENST00000641875 3017 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC139713.2-215ENST00000641428 5037 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AL672167.1-206ENST00000356293 943 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 MIR320B1-201ENST00000390209 79 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-1320P-201ENST00000390838 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-1269P-201ENST00000391139 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RPS26P8-201ENST00000393490 348 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AL136131.1-201ENST00000406079 803 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RN7SKP222-201ENST00000410651 315 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AL022400.1-201ENST00000423946 935 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RPL21P91-201ENST00000429231 479 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC114495.1-201ENST00000441274 436 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-599P-201ENST00000459383 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-1193P-201ENST00000459461 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC104687.1-201ENST00000485829 412 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms