Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQB2P05538 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 PRO1804-201ENST00000623780 2050 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC234772.1-201ENST00000377927 937 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 MIR670-201ENST00000390142 98 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 GLRXP1-201ENST00000423261 334 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 ETF1P3-201ENST00000430422 1160 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC092013.1-201ENST00000438795 332 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 ATP5C1P1-201ENST00000441945 895 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 VN1R34P-201ENST00000447387 883 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 OR6C72P-201ENST00000451403 892 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 RPS4XP10-201ENST00000465034 731 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC010627.1-201ENST00000503819 1294 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AGGF1P8-201ENST00000562979 1000 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC015917.1-201ENST00000579654 510 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AL356321.1-201ENST00000621360 228 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AC009452.1-201ENST00000640823 606 ntBASIC3.37□□□□□ -1.87
HLA-DQB2P05538 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQB2P05538 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC106871.1-201ENST00000568324 3102 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 TNPO1P3-201ENST00000436471 2662 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 SNORA48.7-201ENST00000391302 135 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 MTCO3P21-201ENST00000430791 643 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC093716.1-201ENST00000435923 377 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC005019.1-201ENST00000436455 431 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 RPL21P129-201ENST00000491732 478 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC021678.1-201ENST00000505195 936 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 SNORD116-26-201ENST00000516006 96 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC087888.1-201ENST00000550884 1254 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AL109741.3-201ENST00000561748 592 ntBASIC3.36□□□□□ -1.87
HLA-DQB2P05538 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQB2P05538 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 RNU6-225P-201ENST00000384613 103 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 RNA5SP229-201ENST00000410809 99 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 RPS7P15-201ENST00000415804 584 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC012065.2-201ENST00000421295 375 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC097713.2-201ENST00000430199 356 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 CACYBPP1-201ENST00000438592 684 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms