Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC111193.1-201ENST00000504097 155 ntBASIC4.2□□□□□ -1.74
VTNP04004 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 RNU6-276P-201ENST00000516114 96 ntBASIC4.2□□□□□ -1.74
VTNP04004 OR7E13P-201ENST00000526052 910 ntBASIC4.2□□□□□ -1.74
VTNP04004 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VTNP04004 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
VTNP04004 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.2□□□□□ -1.74
VTNP04004 Z82195.1-201ENST00000604558 398 ntBASIC4.2□□□□□ -1.74
VTNP04004 AC244100.1-202ENST00000621554 382 ntBASIC4.2□□□□□ -1.74
VTNP04004 AC015726.3-201ENST00000624501 418 ntBASIC4.2□□□□□ -1.74
VTNP04004 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.2□□□□□ -1.74
VTNP04004 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.2□□□□□ -1.74
VTNP04004 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTNP04004 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VTNP04004 AC068254.2-201ENST00000623938 3577 ntBASIC4.2□□□□□ -1.74
VTNP04004 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTNP04004 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTNP04004 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTNP04004 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 AC017007.4-201ENST00000503353 1352 ntBASIC4.19□□□□□ -1.74
VTNP04004 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 RNU5B-1-201ENST00000363286 116 ntBASIC4.19□□□□□ -1.74
VTNP04004 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VTNP04004 SOD2P1-201ENST00000396543 562 ntBASIC4.19□□□□□ -1.74
VTNP04004 RPL7P60-201ENST00000397636 735 ntBASIC4.19□□□□□ -1.74
VTNP04004 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.19□□□□□ -1.74
VTNP04004 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 AC246680.2-201ENST00000422106 389 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 NPM1P24-201ENST00000428039 894 ntBASIC4.19□□□□□ -1.74
VTNP04004 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC004854.1-201ENST00000440356 349 ntBASIC4.19□□□□□ -1.74
VTNP04004 RPL7L1P1-201ENST00000448259 785 ntBASIC4.19□□□□□ -1.74
VTNP04004 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
VTNP04004 AL035407.2-201ENST00000454090 378 ntBASIC4.19□□□□□ -1.74
VTNP04004 DUXAP8-207ENST00000456786 622 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.19□□□□□ -1.74
VTNP04004 APOOP2-201ENST00000461561 539 ntBASIC4.19□□□□□ -1.74
VTNP04004 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 AC010376.1-201ENST00000522101 334 ntBASIC4.19□□□□□ -1.74
VTNP04004 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.19□□□□□ -1.74
VTNP04004 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.19□□□□□ -1.74
VTNP04004 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.19□□□□□ -1.74
VTNP04004 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.19□□□□□ -1.74
VTNP04004 MIR4509-3-201ENST00000578671 94 ntBASIC4.19□□□□□ -1.74
VTNP04004 MIR4509-2-201ENST00000583920 94 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC008739.3-201ENST00000603262 127 ntBASIC4.19□□□□□ -1.74
VTNP04004 AP002802.2-201ENST00000605877 235 ntBASIC4.19□□□□□ -1.74
VTNP04004 DUXAP10-204ENST00000612052 616 ntBASIC4.19□□□□□ -1.74
VTNP04004 MIR4509-1-201ENST00000618224 94 ntBASIC4.19□□□□□ -1.74
VTNP04004 AL356121.2-201ENST00000624715 780 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC009093.8-201ENST00000641769 292 ntBASIC4.19□□□□□ -1.74
VTNP04004 AC093535.2-201ENST00000624769 2326 ntBASIC4.19□□□□□ -1.74
VTNP04004 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 MFSD8-236ENST00000641509 4050 ntBASIC4.19□□□□□ -1.74
VTNP04004 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VTNP04004 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
VTNP04004 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTNP04004 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VTNP04004 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VTNP04004 RNF6P1-201ENST00000444889 1784 ntBASIC4.18□□□□□ -1.74
VTNP04004 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VTNP04004 RNU6-317P-201ENST00000384031 107 ntBASIC4.18□□□□□ -1.74
VTNP04004 AL121834.1-202ENST00000404494 277 ntBASIC4.18□□□□□ -1.74
VTNP04004 HMGB3P31-201ENST00000413333 595 ntBASIC4.18□□□□□ -1.74
VTNP04004 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 EIF4EP1-201ENST00000422311 642 ntBASIC4.18□□□□□ -1.74
VTNP04004 AC073310.1-201ENST00000423226 1033 ntBASIC4.18□□□□□ -1.74
VTNP04004 AC009965.2-201ENST00000425328 970 ntBASIC4.18□□□□□ -1.74
VTNP04004 KCTD9P3-201ENST00000434597 1169 ntBASIC4.18□□□□□ -1.74
VTNP04004 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.18□□□□□ -1.74
VTNP04004 RPS20P1-201ENST00000434853 354 ntBASIC4.18□□□□□ -1.74
VTNP04004 AL031663.1-201ENST00000437445 219 ntBASIC4.18□□□□□ -1.74
VTNP04004 CBX1P4-201ENST00000439415 457 ntBASIC4.18□□□□□ -1.74
VTNP04004 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.18□□□□□ -1.74
VTNP04004 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.18□□□□□ -1.74
VTNP04004 RPS6P2-201ENST00000454208 705 ntBASIC4.18□□□□□ -1.74
VTNP04004 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.18□□□□□ -1.74
VTNP04004 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.18□□□□□ -1.74
VTNP04004 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 UBE2V1P12-201ENST00000503954 474 ntBASIC4.18□□□□□ -1.74
VTNP04004 HMGN1P11-201ENST00000508668 303 ntBASIC4.18□□□□□ -1.74
VTNP04004 AC010460.2-201ENST00000509054 677 ntBASIC4.18□□□□□ -1.74
VTNP04004 AC104619.4-201ENST00000510773 249 ntBASIC4.18□□□□□ -1.74
VTNP04004 RAC1P2-201ENST00000511164 579 ntBASIC4.18□□□□□ -1.74
VTNP04004 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.18□□□□□ -1.74
VTNP04004 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms