Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
COL1A1P02452 AC116096.1-201ENST00000566804 2314 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.94□□□□□ -1.78
COL1A1P02452 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 MTND4LP20-201ENST00000402379 270 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.94□□□□□ -1.78
COL1A1P02452 MRPS31P2-201ENST00000451581 518 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 AC135999.1-201ENST00000478962 479 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.94□□□□□ -1.78
COL1A1P02452 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.94□□□□□ -1.78
COL1A1P02452 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.94□□□□□ -1.78
COL1A1P02452 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.94□□□□□ -1.78
COL1A1P02452 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.94□□□□□ -1.78
COL1A1P02452 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 ATP5A1P2-202ENST00000616464 443 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.94□□□□□ -1.78
COL1A1P02452 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL1A1P02452 LINC01355-201ENST00000566551 5444 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.94□□□□□ -1.78
COL1A1P02452 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
COL1A1P02452 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AL139095.1-201ENST00000404326 391 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.93□□□□□ -1.78
COL1A1P02452 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.93□□□□□ -1.78
COL1A1P02452 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.93□□□□□ -1.78
COL1A1P02452 ARL2BPP6-201ENST00000512757 439 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 SNORA70.19-201ENST00000516717 90 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AC107934.2-201ENST00000518653 310 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
COL1A1P02452 AC015911.5-201ENST00000587076 451 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AL033523.1-201ENST00000605153 153 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AL122125.1-201ENST00000616999 600 ntBASIC3.93□□□□□ -1.78
COL1A1P02452 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.93□□□□□ -1.78
COL1A1P02452 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL1A1P02452 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
COL1A1P02452 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.93□□□□□ -1.78
COL1A1P02452 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL1A1P02452 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL1A1P02452 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL1A1P02452 ANKRD36P1-201ENST00000344424 659 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.92□□□□□ -1.78
COL1A1P02452 AL356968.1-201ENST00000416622 474 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COL1A1P02452 AL160175.1-201ENST00000428124 247 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 RPL21P8-201ENST00000465083 535 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.92□□□□□ -1.78
COL1A1P02452 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.92□□□□□ -1.78
COL1A1P02452 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 AL121603.1-201ENST00000553815 142 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.92□□□□□ -1.78
COL1A1P02452 AL451049.1-201ENST00000608672 497 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL1A1P02452 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL1A1P02452 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL1A1P02452 RNU6-7-201ENST00000364784 107 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 RNU6-8-201ENST00000365467 107 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 RNA5SP296-201ENST00000410523 111 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL1A1P02452 ETF1P3-201ENST00000430422 1160 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 CCRL1P1-201ENST00000449542 1053 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 MTND6P32-201ENST00000457611 483 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 TRBV8-2-201ENST00000475637 270 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC138409.2-202ENST00000507274 458 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.92□□□□□ -1.78
COL1A1P02452 RPL7L1P13-201ENST00000511702 739 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 AC006518.1-201ENST00000541449 943 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.92□□□□□ -1.78
COL1A1P02452 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.92□□□□□ -1.78
COL1A1P02452 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.92□□□□□ -1.78
COL1A1P02452 MIR7106-201ENST00000612419 65 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 AL356321.1-201ENST00000621360 228 ntBASIC3.92□□□□□ -1.78
COL1A1P02452 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.92□□□□□ -1.78
COL1A1P02452 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL1A1P02452 CDC27P2-201ENST00000425026 1922 ntBASIC3.91□□□□□ -1.78
COL1A1P02452 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms