Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFP01375 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFP01375 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
TNFP01375 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFP01375 RNU1-87P-201ENST00000363727 170 ntBASIC3.27□□□□□ -1.89
TNFP01375 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
TNFP01375 AC099336.2-201ENST00000422457 254 ntBASIC3.27□□□□□ -1.89
TNFP01375 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 CYCSP32-201ENST00000440548 321 ntBASIC3.27□□□□□ -1.89
TNFP01375 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AC099560.2-201ENST00000457554 255 ntBASIC3.27□□□□□ -1.89
TNFP01375 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AC068305.1-201ENST00000497406 726 ntBASIC3.27□□□□□ -1.89
TNFP01375 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.27□□□□□ -1.89
TNFP01375 IGKV2-23-201ENST00000518729 323 ntBASIC3.27□□□□□ -1.89
TNFP01375 KCTD9P6-201ENST00000522306 950 ntBASIC3.27□□□□□ -1.89
TNFP01375 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFP01375 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TNFP01375 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFP01375 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
TNFP01375 MIR8057-201ENST00000620957 69 ntBASIC3.27□□□□□ -1.89
TNFP01375 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TNFP01375 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TNFP01375 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
TNFP01375 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TNFP01375 RPS4XP5-202ENST00000449995 1334 ntBASIC3.26□□□□□ -1.89
TNFP01375 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFP01375 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFP01375 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TNFP01375 RPL17P50-201ENST00000396131 546 ntBASIC3.26□□□□□ -1.89
TNFP01375 AL136116.1-201ENST00000403591 381 ntBASIC3.26□□□□□ -1.89
TNFP01375 HMGB3P18-201ENST00000406327 590 ntBASIC3.26□□□□□ -1.89
TNFP01375 Z98941.1-201ENST00000407764 100 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFP01375 AL158071.1-201ENST00000430315 461 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFP01375 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFP01375 AC107934.2-201ENST00000518653 310 ntBASIC3.26□□□□□ -1.89
TNFP01375 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFP01375 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFP01375 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFP01375 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFP01375 AC092868.3-201ENST00000560515 784 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFP01375 AGGF1P8-201ENST00000562979 1000 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFP01375 MIR4738-201ENST00000579134 87 ntBASIC3.26□□□□□ -1.89
TNFP01375 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFP01375 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFP01375 AC010680.3-201ENST00000604215 520 ntBASIC3.26□□□□□ -1.89
TNFP01375 AC110801.1-201ENST00000623590 212 ntBASIC3.26□□□□□ -1.89
TNFP01375 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFP01375 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFP01375 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFP01375 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TNFP01375 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
TNFP01375 RNU4-47P-201ENST00000410876 114 ntBASIC3.25□□□□□ -1.89
TNFP01375 AL024507.1-201ENST00000412741 274 ntBASIC3.25□□□□□ -1.89
TNFP01375 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 AL353678.1-201ENST00000422735 741 ntBASIC3.25□□□□□ -1.89
TNFP01375 AL512649.1-201ENST00000428997 581 ntBASIC3.25□□□□□ -1.89
TNFP01375 RPS26P40-201ENST00000435209 294 ntBASIC3.25□□□□□ -1.89
TNFP01375 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFP01375 Z75741.1-201ENST00000446793 314 ntBASIC3.25□□□□□ -1.89
TNFP01375 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 SETP6-201ENST00000479329 568 ntBASIC3.25□□□□□ -1.89
TNFP01375 ACTG1P13-201ENST00000486987 1043 ntBASIC3.25□□□□□ -1.89
TNFP01375 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 USP9YP5-201ENST00000511770 630 ntBASIC3.25□□□□□ -1.89
TNFP01375 PHBP14-201ENST00000512887 367 ntBASIC3.25□□□□□ -1.89
TNFP01375 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
TNFP01375 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.25□□□□□ -1.89
TNFP01375 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms