Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 ZNF285B-201ENST00000561698 1767 ntBASIC3.91□□□□□ -1.78
SDC3O75056 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SDC3O75056 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SDC3O75056 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.9□□□□□ -1.78
SDC3O75056 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.9□□□□□ -1.78
SDC3O75056 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
SDC3O75056 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.9□□□□□ -1.78
SDC3O75056 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SDC3O75056 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SDC3O75056 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SDC3O75056 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDC3O75056 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SDC3O75056 RNA5SP27-201ENST00000363839 119 ntBASIC3.9□□□□□ -1.79
SDC3O75056 Y_RNA.333-201ENST00000365274 102 ntBASIC3.9□□□□□ -1.79
SDC3O75056 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SDC3O75056 MIR449B-201ENST00000384995 97 ntBASIC3.9□□□□□ -1.79
SDC3O75056 RPS3AP25-201ENST00000411660 793 ntBASIC3.9□□□□□ -1.79
SDC3O75056 PGBD4P8-201ENST00000412993 562 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SDC3O75056 CRYBB2P1-203ENST00000415709 538 ntBASIC3.9□□□□□ -1.79
SDC3O75056 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 Z97055.1-201ENST00000419730 712 ntBASIC3.9□□□□□ -1.79
SDC3O75056 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 UBE2V1P6-201ENST00000430840 422 ntBASIC3.9□□□□□ -1.79
SDC3O75056 ELOCP18-201ENST00000434209 337 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.9□□□□□ -1.79
SDC3O75056 AC092809.1-201ENST00000441469 474 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 HMGB1P48-201ENST00000446155 598 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 AL133477.1-201ENST00000457472 514 ntBASIC3.9□□□□□ -1.79
SDC3O75056 RPL32P14-201ENST00000463196 378 ntBASIC3.9□□□□□ -1.79
SDC3O75056 RPL37P6-202ENST00000464216 403 ntBASIC3.9□□□□□ -1.79
SDC3O75056 RPL7P49-201ENST00000471402 708 ntBASIC3.9□□□□□ -1.79
SDC3O75056 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.9□□□□□ -1.79
SDC3O75056 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.9□□□□□ -1.79
SDC3O75056 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.9□□□□□ -1.79
SDC3O75056 RN7SKP157-201ENST00000516174 282 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.9□□□□□ -1.79
SDC3O75056 MTND1P36-201ENST00000522384 936 ntBASIC3.9□□□□□ -1.79
SDC3O75056 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.9□□□□□ -1.79
SDC3O75056 AC091516.1-201ENST00000549191 703 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AL442163.2-201ENST00000553912 710 ntBASIC3.9□□□□□ -1.79
SDC3O75056 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.9□□□□□ -1.79
SDC3O75056 AC012254.4-201ENST00000588843 273 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC092574.1-201ENST00000609771 420 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC064801.1-201ENST00000612025 407 ntBASIC3.9□□□□□ -1.79
SDC3O75056 AC138907.10-201ENST00000623708 983 ntBASIC3.9□□□□□ -1.79
SDC3O75056 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDC3O75056 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SDC3O75056 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SDC3O75056 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SDC3O75056 AC104446.1-201ENST00000613728 1321 ntBASIC3.9□□□□□ -1.79
SDC3O75056 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
SDC3O75056 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.9□□□□□ -1.79
SDC3O75056 AC008725.1-201ENST00000605123 2263 ntBASIC3.9□□□□□ -1.79
SDC3O75056 SEC63P2-201ENST00000503863 1939 ntBASIC3.89□□□□□ -1.79
SDC3O75056 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.89□□□□□ -1.79
SDC3O75056 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SDC3O75056 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SDC3O75056 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SDC3O75056 SNORA63.1-201ENST00000362493 131 ntBASIC3.89□□□□□ -1.79
SDC3O75056 RN7SKP44-201ENST00000363602 316 ntBASIC3.89□□□□□ -1.79
SDC3O75056 RNA5SP399-201ENST00000364003 117 ntBASIC3.89□□□□□ -1.79
SDC3O75056 MIR153-1-201ENST00000384914 90 ntBASIC3.89□□□□□ -1.79
SDC3O75056 RN7SKP177-201ENST00000410567 355 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC092745.2-202ENST00000411880 369 ntBASIC3.89□□□□□ -1.79
SDC3O75056 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.89□□□□□ -1.79
SDC3O75056 BX664727.1-201ENST00000416024 466 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC008173.1-201ENST00000418901 264 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.89□□□□□ -1.79
SDC3O75056 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.89□□□□□ -1.79
SDC3O75056 AL035407.2-201ENST00000454090 378 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC008379.1-201ENST00000463655 464 ntBASIC3.89□□□□□ -1.79
SDC3O75056 RPL7L1P8-201ENST00000469911 741 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.89□□□□□ -1.79
SDC3O75056 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.89□□□□□ -1.79
SDC3O75056 AC112518.2-201ENST00000508565 425 ntBASIC3.89□□□□□ -1.79
SDC3O75056 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.89□□□□□ -1.79
SDC3O75056 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.89□□□□□ -1.79
SDC3O75056 AC083923.1-201ENST00000523708 376 ntBASIC3.89□□□□□ -1.79
SDC3O75056 OR5M7P-201ENST00000526140 972 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.89□□□□□ -1.79
SDC3O75056 AC092451.2-201ENST00000538746 658 ntBASIC3.89□□□□□ -1.79
SDC3O75056 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
SDC3O75056 CYCSP30-201ENST00000546447 172 ntBASIC3.89□□□□□ -1.79
SDC3O75056 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.89□□□□□ -1.79
SDC3O75056 AC087499.8-201ENST00000578406 226 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.89□□□□□ -1.79
SDC3O75056 LLPHP1-201ENST00000603571 367 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC120053.1-201ENST00000607706 736 ntBASIC3.89□□□□□ -1.79
SDC3O75056 VN1R9P-201ENST00000614184 867 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC073530.2-201ENST00000623987 261 ntBASIC3.89□□□□□ -1.79
SDC3O75056 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.89□□□□□ -1.79
SDC3O75056 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.89□□□□□ -1.79
SDC3O75056 AP002001.2-201ENST00000529025 1469 ntBASIC3.89□□□□□ -1.79
SDC3O75056 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.89□□□□□ -1.79
SDC3O75056 ENSAP3-201ENST00000312710 333 ntBASIC3.88□□□□□ -1.79
SDC3O75056 RNA5SP97-201ENST00000365006 84 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms