Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 ACTR6P1-201ENST00000514311 1104 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 AC034244.2-201ENST00000514668 858 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 MTCO1P35-201ENST00000515270 228 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.62□□□□□ -1.83
SHOX2O60902 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.62□□□□□ -1.83
SHOX2O60902 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.62□□□□□ -1.83
SHOX2O60902 AC023161.2-201ENST00000551218 780 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 AL161713.1-201ENST00000555538 145 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 RPL21P12-201ENST00000559810 515 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 AC006116.5-201ENST00000591936 559 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.62□□□□□ -1.83
SHOX2O60902 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.62□□□□□ -1.83
SHOX2O60902 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 AL137246.1-201ENST00000607072 977 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.62□□□□□ -1.83
SHOX2O60902 AL391834.1-201ENST00000609609 560 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.62□□□□□ -1.83
SHOX2O60902 MTCO1P14-201ENST00000441695 1559 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHOX2O60902 ELL2P4-201ENST00000446870 1376 ntBASIC3.62□□□□□ -1.83
SHOX2O60902 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHOX2O60902 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOX2O60902 SNORA9-201ENST00000384215 133 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHOX2O60902 AC013404.1-201ENST00000413068 249 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOX2O60902 AL513174.1-201ENST00000423182 629 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 RPL30P3-201ENST00000424262 333 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AL121578.1-201ENST00000428051 892 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AL356276.2-201ENST00000435919 558 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AL645931.1-201ENST00000439737 410 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 CFTRP1-201ENST00000456646 183 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.61□□□□□ -1.83
SHOX2O60902 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOX2O60902 SETP14-201ENST00000497538 873 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 TRAV31-201ENST00000502780 342 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AC022790.1-201ENST00000522872 204 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 OR7E13P-201ENST00000526052 910 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SHOX2O60902 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.61□□□□□ -1.83
SHOX2O60902 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.61□□□□□ -1.83
SHOX2O60902 MIR8059-201ENST00000620427 81 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AC010608.2-201ENST00000624830 470 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 AC073476.4-201ENST00000628409 72 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.61□□□□□ -1.83
SHOX2O60902 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHOX2O60902 MFSD8-236ENST00000641509 4050 ntBASIC3.61□□□□□ -1.83
SHOX2O60902 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.61□□□□□ -1.83
SHOX2O60902 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.61□□□□□ -1.83
SHOX2O60902 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.6□□□□□ -1.83
SHOX2O60902 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHOX2O60902 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHOX2O60902 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHOX2O60902 RNU6-386P-201ENST00000362650 107 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 RNU6-618P-201ENST00000363518 112 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 RNU4-6P-201ENST00000410804 122 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 NDUFB4P5-201ENST00000415445 361 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.6□□□□□ -1.83
SHOX2O60902 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 CEACAMP4-201ENST00000457676 421 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 AC018635.1-201ENST00000468292 1030 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SHOX2O60902 RN7SL283P-201ENST00000489055 303 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC118282.1-201ENST00000506408 765 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 AC119751.1-201ENST00000513357 765 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC016550.3-201ENST00000515706 767 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 RNU1-143P-201ENST00000516296 146 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC008083.2-201ENST00000546707 476 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 AC023575.1-201ENST00000580510 358 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 MIR4513-201ENST00000581077 86 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 KPNA2P3-201ENST00000584190 848 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.6□□□□□ -1.83
SHOX2O60902 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOX2O60902 AC005021.1-201ENST00000608730 355 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 U1.23-201ENST00000610293 146 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 RNU1-68P-201ENST00000615382 146 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 AL589935.2-201ENST00000616471 1231 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 ZYXP1-201ENST00000617638 118 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 U1.39-201ENST00000621562 146 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 AC019080.5-201ENST00000624891 757 ntBASIC3.6□□□□□ -1.83
SHOX2O60902 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHOX2O60902 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
SHOX2O60902 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHOX2O60902 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.6□□□□□ -1.83
SHOX2O60902 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms