Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC021851.1-201ENST00000608537 1082 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC018926.1-201ENST00000616335 435 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AP000943.4-201ENST00000622912 357 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 AC011944.2-201ENST00000624440 683 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 CDRT1-208ENST00000630868 794 ntBASIC3.84□□□□□ -1.79
PDLIM1O00151 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.84□□□□□ -1.79
PDLIM1O00151 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.84□□□□□ -1.79
PDLIM1O00151 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM1O00151 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PDLIM1O00151 AC091152.2-201ENST00000591628 2569 ntBASIC3.84□□□□□ -1.8
PDLIM1O00151 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDLIM1O00151 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDLIM1O00151 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM1O00151 IPO8P1-201ENST00000455509 3109 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 MIR525-201ENST00000384978 85 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 RPL21P109-201ENST00000422213 475 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 DEFB130D-201ENST00000426866 237 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.83□□□□□ -1.8
PDLIM1O00151 NPM1P34-201ENST00000428821 893 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC073143.1-201ENST00000436316 395 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC105402.2-201ENST00000438503 358 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 RPL23AP52-201ENST00000439311 478 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 ACTR3P2-201ENST00000439585 1257 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AL158053.1-201ENST00000441503 453 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.83□□□□□ -1.8
PDLIM1O00151 TVP23BP2-201ENST00000455082 615 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 NDUFA5P9-201ENST00000472609 340 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC092185.1-201ENST00000491371 97 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 RN7SL691P-201ENST00000494487 301 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC010374.1-201ENST00000503762 1237 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 MTATP6P22-201ENST00000507369 598 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 IGBP1P5-201ENST00000507524 1000 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC093840.1-201ENST00000511599 336 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM1O00151 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC010306.1-201ENST00000523223 1117 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM1O00151 RPL23AP87-202ENST00000573039 466 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM1O00151 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM1O00151 AL445423.1-201ENST00000609941 536 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC083809.1-201ENST00000615051 472 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AC078880.5-201ENST00000617845 421 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 MIR6810-201ENST00000622701 70 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AL445363.3-201ENST00000623080 671 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 AP005264.7-201ENST00000625003 745 ntBASIC3.83□□□□□ -1.8
PDLIM1O00151 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM1O00151 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
PDLIM1O00151 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM1O00151 AL136520.1-201ENST00000600311 1322 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC104446.1-201ENST00000613728 1321 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC068538.1-201ENST00000376856 336 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 MRPL50P1-201ENST00000431951 384 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM1O00151 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM1O00151 RPS23P7-201ENST00000466210 444 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC026979.1-201ENST00000492525 396 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC104629.1-201ENST00000494226 508 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC004069.2-201ENST00000505438 1114 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM1O00151 HPRT1P1-201ENST00000509498 657 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC112206.4-201ENST00000515142 405 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC008562.1-201ENST00000521763 330 ntBASIC3.82□□□□□ -1.8
PDLIM1O00151 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM1O00151 PTP4A1P6-201ENST00000531034 478 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms