Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL32P3-201ENST00000359025 275 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RNA5SP391-201ENST00000363456 119 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-511P-201ENST00000363496 107 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-1243P-201ENST00000364028 107 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 U3.52-201ENST00000384034 216 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL121834.1-202ENST00000404494 277 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SKP205-201ENST00000410999 307 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 NUP35P1-201ENST00000422734 947 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MRPS31P2-201ENST00000451581 518 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 SNX18P26-201ENST00000458433 740 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 SNORD121B-201ENST00000458838 81 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC104164.1-201ENST00000460282 590 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC004801.2-202ENST00000463559 283 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SL267P-201ENST00000485107 261 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SL655P-201ENST00000486087 298 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC017037.2-201ENST00000513850 890 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SKP295-201ENST00000517264 153 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL137161.1-201ENST00000532231 390 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC005191.1-201ENST00000603950 358 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC007938.3-201ENST00000604965 623 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 Z82243.1-201ENST00000609432 473 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AP001486.3-201ENST00000615334 372 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MIR6085-201ENST00000618314 110 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC022418.1-201ENST00000624118 445 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC011978.2-201ENST00000569835 2054 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 SNORD8-201ENST00000363915 110 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 Y_RNA.212-201ENST00000364177 102 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU2-15P-201ENST00000410692 191 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC116036.1-201ENST00000412199 367 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AL591848.1-201ENST00000413092 322 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC110602.1-201ENST00000437414 318 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 RPS7P3-201ENST00000443360 580 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 SNRPCP3-201ENST00000474888 476 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC106800.3-201ENST00000511389 308 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 snoU109.6-201ENST00000516831 118 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 HMGB1P19-201ENST00000517578 577 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 WBP1LP3-201ENST00000523033 208 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AP005639.1-201ENST00000526939 192 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC109635.4-202ENST00000531666 412 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC073916.1-201ENST00000545095 130 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 AC026956.1-201ENST00000558741 396 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 MIR6070-201ENST00000613967 103 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 SAGE3P-201ENST00000619800 1635 ntBASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PCDHGA11Q9Y5H2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA11Q9Y5H2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA11Q9Y5H2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms