Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 MIR6748-201ENST00000610433 71 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 MIR6758-201ENST00000620653 63 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AC090506.2-201ENST00000624521 419 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 MIR6830-201ENST00000636015 70 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 U6.107-201ENST00000637108 79 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 OR52H1-202ENST00000641796 1061 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDD3Q9Y3P4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC138915.3-201ENST00000562908 1389 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 RPL32P3-201ENST00000359025 275 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 RNA5SP399-201ENST00000364003 117 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 RNU6-40P-201ENST00000384254 107 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC005517.2-201ENST00000424673 553 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 SNORA71B-202ENST00000439232 272 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 HMGB1P37-201ENST00000439613 609 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AP000893.1-201ENST00000474462 794 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC008885.2-201ENST00000509506 930 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 NARSP2-201ENST00000518524 679 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC087369.1-201ENST00000520775 996 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC091516.1-201ENST00000549191 703 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 HMGN2P28-201ENST00000606102 262 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 MIR6716-201ENST00000613413 80 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDD3Q9Y3P4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.86
RHBDD3Q9Y3P4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL121657.1-201ENST00000327215 531 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 SNORD115-48-201ENST00000364764 76 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 RNU2-71P-201ENST00000411395 189 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 OR8G2P-201ENST00000412796 908 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 RFESDP1-201ENST00000422350 461 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL590623.1-201ENST00000427864 105 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 ZNF965P-201ENST00000432501 817 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 TBCAP1-201ENST00000436520 327 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 RPS26P56-201ENST00000444468 240 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC009220.1-201ENST00000451614 275 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AC093267.1-201ENST00000489176 961 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 AL132838.2-201ENST00000492041 314 ntBASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RHBDD3Q9Y3P4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms