Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RPL21P112-201ENST00000434403 463 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC094019.1-201ENST00000434678 472 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL445466.1-201ENST00000448432 357 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RN7SL643P-201ENST00000471845 291 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RPL21P93-201ENST00000480465 489 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RPS4XP14-201ENST00000493072 781 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 IGHV4-55-201ENST00000520889 368 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC091516.1-201ENST00000549191 703 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC011477.5-201ENST00000586571 259 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC244100.1-202ENST00000621554 382 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AC009831.5-201ENST00000624000 3189 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 PARP4P1-201ENST00000435945 2337 ntBASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TRIM35Q9UPQ4 AL049634.1-201ENST00000453770 1720 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 MIR411-201ENST00000362239 96 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.277-201ENST00000364754 102 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-1168P-201ENST00000390831 104 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AL590632.1-201ENST00000424289 371 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC091286.1-201ENST00000431233 461 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RPS7P5-201ENST00000441482 581 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC079804.1-201ENST00000461922 436 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RN7SL552P-201ENST00000462094 276 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC026979.1-201ENST00000492525 396 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 PGAM1P13-201ENST00000507497 754 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 ZNF519P4-201ENST00000514008 125 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 IGKV1D-22-201ENST00000518953 324 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RPA2P3-201ENST00000533268 770 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC025857.2-201ENST00000602711 238 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC020910.3-201ENST00000603701 874 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 HMGN2P28-201ENST00000606102 262 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC002044.1-201ENST00000606707 158 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AL450472.1-202ENST00000637286 180 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 AC105749.1-201ENST00000631338 2008 ntBASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TRIM35Q9UPQ4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
TRIM35Q9UPQ4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
TRIM35Q9UPQ4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
TRIM35Q9UPQ4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 Y_RNA.84-201ENST00000363011 104 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 Y_RNA.199-201ENST00000364014 102 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 RNU4-42P-201ENST00000364738 142 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 RNU6-128P-201ENST00000383976 107 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC097374.1-203ENST00000400783 485 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AL583834.1-201ENST00000406943 343 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC016027.5-201ENST00000427227 210 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 RPL23AP43-201ENST00000446445 471 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC026410.2-201ENST00000460281 156 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 PABPC1P3-201ENST00000469174 459 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 CBX3P8-201ENST00000532412 525 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC011921.3-201ENST00000605540 361 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC008937.3-201ENST00000606813 1700 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AC024255.1-201ENST00000614376 102 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 RBPJP2-201ENST00000618187 1444 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 U6.114-201ENST00000636407 96 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 AL034408.1-201ENST00000637712 664 ntBASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TRIM35Q9UPQ4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms