Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AL133153.1-201ENST00000557756 303 ntBASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 ULK4P1-202ENST00000565174 503 ntBASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC103705.1-201ENST00000619013 241 ntBASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AL445363.3-201ENST00000623080 671 ntBASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AC011416.1-201ENST00000514947 1732 ntBASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LIMD1Q9UGP4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL359195.2-201ENST00000623657 4412 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 TPTE2P4-201ENST00000258589 1605 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 RNU5E-6P-201ENST00000365574 115 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 RN7SKP62-201ENST00000384539 329 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL590609.2-201ENST00000421430 368 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 PDSS1P1-201ENST00000422953 1114 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC092651.1-201ENST00000426110 312 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 FABP5P2-201ENST00000439042 408 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 RPL23AP89-201ENST00000439324 255 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL645936.1-201ENST00000441979 518 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 LSM3P4-201ENST00000502948 309 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 HIGD1AP13-201ENST00000509878 289 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC060775.1-201ENST00000518241 520 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 WBP1LP3-201ENST00000523033 208 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 SULT1C2P2-201ENST00000562517 294 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC008507.3-201ENST00000585753 472 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AC010378.1-201ENST00000619270 362 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 AL669831.3-213ENST00000636676 183 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 OR55B1P-203ENST00000641518 2602 ntBASIC6.8□□□□□ -1.32
LIMD1Q9UGP4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LIMD1Q9UGP4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms