Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 RNU6-1097P-201ENST00000363586 107 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 Y_RNA.160-201ENST00000363677 92 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 RNU6-339P-201ENST00000384310 107 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 Y_RNA.548-201ENST00000384656 105 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AL356776.1-201ENST00000406574 447 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC137499.1-201ENST00000427602 88 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 FTH1P1-201ENST00000437933 532 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC098614.3-201ENST00000438957 440 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 MTND4LP16-201ENST00000440828 295 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 HMGN1P36-201ENST00000446623 298 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 HMGB3P21-201ENST00000452483 547 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 SNORD121B-201ENST00000458838 81 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 RN7SL741P-201ENST00000482473 289 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 RNU6-27P-201ENST00000516146 107 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC026826.3-201ENST00000561747 158 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 KC877982.1-201ENST00000602313 470 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC124916.2-201ENST00000604416 224 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC108673.3-201ENST00000609183 335 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AP001052.1-201ENST00000626421 99 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC022325.1-201ENST00000502748 2199 ntBASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTI1BQ9UEU0 AC093849.1-201ENST00000563631 2209 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC105074.1-201ENST00000623380 3095 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC131971.1-201ENST00000332881 1482 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 MIR133A2-201ENST00000347538 102 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 RNY3P3-201ENST00000363816 102 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 RNU1-65P-201ENST00000363919 148 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 RNU5A-8P-201ENST00000364102 114 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 RN7SKP187-201ENST00000365536 330 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC068050.1-201ENST00000394891 380 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 GCNT1P4-201ENST00000404096 329 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL133482.1-201ENST00000415988 498 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 MRPL50P2-201ENST00000416821 482 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 CYCSP10-201ENST00000417973 294 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC245054.1-201ENST00000420944 258 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC099677.3-201ENST00000427081 395 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 TIMM9P1-201ENST00000436122 256 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC012075.1-201ENST00000436549 580 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 SEPT14P3-201ENST00000439401 183 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AL732372.2-207ENST00000445840 183 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 AC016027.4-201ENST00000450866 277 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 IGHV5-78-201ENST00000450948 295 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 SEPT14P2-201ENST00000453405 183 ntBASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.79□□□□□ -1.48
VTI1BQ9UEU0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms