Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC008413.1-201ENST00000511864 177 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC034159.1-201ENST00000513885 583 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC106785.3-201ENST00000564064 847 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD7Q9P2D1 ASNSP1-201ENST00000518311 1939 ntBASIC3.26□□□□□ -1.89
CHD7Q9P2D1 AL672167.1-206ENST00000356293 943 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 RPSAP41-201ENST00000439695 860 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AL513328.1-201ENST00000446460 224 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AC016696.1-201ENST00000446949 318 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AL022311.1-201ENST00000623726 19416 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 SNORA70B-201ENST00000384210 135 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 NPM1P37-201ENST00000403105 874 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 AC023389.2-201ENST00000580031 955 ntBASIC3.25□□□□□ -1.89
CHD7Q9P2D1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD7Q9P2D1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 NPM1P11-201ENST00000417106 855 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC063976.3-201ENST00000426849 329 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RPS26P47-201ENST00000427219 348 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RPS26P3-201ENST00000470205 348 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 SNRPCP3-201ENST00000474888 476 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC004057.1-201ENST00000485827 348 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RPL23AP73-201ENST00000492507 471 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC090312.2-201ENST00000582687 378 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC024153.1-201ENST00000603103 365 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL158062.1-201ENST00000619632 745 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL669942.2-201ENST00000620352 697 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC006484.1-201ENST00000435086 1884 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 OR5AP1P-201ENST00000529730 940 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL035413.2-201ENST00000604801 525 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AL356057.1-202ENST00000402263 756 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 ARL5AP4-201ENST00000430731 512 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AC112653.1-201ENST00000443851 386 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 U1.23-201ENST00000610293 146 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 RNU1-68P-201ENST00000615382 146 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 U1.39-201ENST00000621562 146 ntBASIC3.24□□□□□ -1.89
CHD7Q9P2D1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD7Q9P2D1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 RPL21P6-201ENST00000479171 504 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 RN7SL371P-201ENST00000578099 267 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC008638.3-201ENST00000603341 463 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC138965.3-201ENST00000623875 498 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC009313.2-201ENST00000417893 1941 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC007390.2-201ENST00000606229 3803 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
CHD7Q9P2D1 HSPE1P8-201ENST00000406997 288 ntBASIC3.23□□□□□ -1.89
CHD7Q9P2D1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms