Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC113430.1-201ENST00000506872 718 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC093840.1-201ENST00000511599 336 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC099522.1-202ENST00000514718 367 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC063950.1-201ENST00000552036 308 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC007599.1-201ENST00000568688 1174 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC096947.1-201ENST00000603233 470 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 AC098679.5-201ENST00000624394 571 ntBASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
BLOC1S4Q9NUP1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC000367.1-201ENST00000452711 1766 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AL133384.1-201ENST00000412744 351 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 MTCYBP24-201ENST00000420387 1106 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 RPF2P1-201ENST00000424137 906 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 MTCO1P3-201ENST00000429327 192 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 RPS27AP12-201ENST00000429552 465 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 snoU109.3-201ENST00000459477 145 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC022795.1-201ENST00000473808 480 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 RNU6-885P-201ENST00000516607 104 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 CYCSP29-201ENST00000533731 318 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC092470.1-201ENST00000546187 132 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC122134.1-202ENST00000569111 1201 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC022655.2-201ENST00000577280 318 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AL445423.1-201ENST00000609941 536 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 MIR7151-201ENST00000617477 60 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AL445567.2-201ENST00000618935 498 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC104985.3-201ENST00000623479 597 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC026634.1-201ENST00000634369 198 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 MFSD8-245ENST00000641743 948 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 ZNF663P-202ENST00000641770 1131 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC117529.2-201ENST00000512159 2068 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 AC006971.1-201ENST00000407916 4486 ntBASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
BLOC1S4Q9NUP1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
BLOC1S4Q9NUP1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
BLOC1S4Q9NUP1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
BLOC1S4Q9NUP1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BLOC1S4Q9NUP1 OR10J6P-201ENST00000289731 930 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 RNU1-94P-201ENST00000362627 173 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 AL133264.1-201ENST00000407157 562 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 AC114973.1-201ENST00000429057 632 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 COX6B1P7-201ENST00000430845 235 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 GTF2IP3-201ENST00000433887 494 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 RN7SL585P-201ENST00000470538 280 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 UQCRHP4-201ENST00000471686 272 ntBASIC4.65□□□□□ -1.67
BLOC1S4Q9NUP1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms