Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 RPL23AP4-201ENST00000427757 463 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC017083.1-201ENST00000428093 483 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 USP9YP7-201ENST00000436723 430 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 PDSS1P2-201ENST00000449397 678 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 USP9YP32-201ENST00000452432 430 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC106785.3-201ENST00000564064 847 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRTM1Q9HBL6 PRO1804-201ENST00000623780 2050 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 U8.12-201ENST00000384701 133 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC007066.1-201ENST00000392902 381 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 Z92545.1-201ENST00000411782 234 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC092832.1-201ENST00000422934 400 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 RNU6-1218P-201ENST00000458990 108 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC010683.1-201ENST00000473673 378 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC006499.5-201ENST00000505037 514 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC011602.1-201ENST00000546484 331 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 MIR3200-201ENST00000580767 85 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 ABI1P1-201ENST00000603375 1120 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AL034408.1-202ENST00000636088 415 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC007823.1-201ENST00000569932 1566 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 AC058791.1-201ENST00000608412 3198 ntBASIC3.37□□□□□ -1.87
LRTM1Q9HBL6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 MFSD8-233ENST00000641482 4860 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 RNU1-87P-201ENST00000363727 170 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 BOLA3P4-201ENST00000418151 400 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AL159169.1-201ENST00000421119 127 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AL513174.1-201ENST00000423182 629 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 RPL12P26-201ENST00000452430 487 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 HMGN2P7-201ENST00000456186 273 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC018635.1-201ENST00000468292 1030 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC011037.1-201ENST00000483964 558 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms