Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 SNORA70C-201ENST00000384538 135 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 RN7SKP247-201ENST00000411094 308 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 RN7SKP263-201ENST00000411194 309 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 CEACAMP8-201ENST00000413902 580 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL590806.1-201ENST00000415818 853 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC006366.1-201ENST00000422002 759 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 EIF4EP1-201ENST00000422311 642 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC019178.2-201ENST00000423595 505 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 MTCYBP5-201ENST00000423752 1135 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 MTND1P4-201ENST00000435196 415 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL929288.2-201ENST00000446368 407 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL935212.3-201ENST00000450729 284 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 RPS7P7-201ENST00000463499 571 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC105137.1-201ENST00000484355 562 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC023050.1-201ENST00000498198 304 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 RNU6-232P-201ENST00000517144 64 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 MRPL49P2-201ENST00000521066 465 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 DEFB130C-202ENST00000530001 230 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC022069.1-201ENST00000582910 658 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC067959.1-201ENST00000604334 379 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC109347.2-201ENST00000610220 349 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC009237.17-201ENST00000618111 748 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC091931.1-201ENST00000623488 728 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 OR1S1-201ENST00000624470 978 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 OR2L1P-202ENST00000641567 1023 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 EOGT-210ENST00000615922 1931 ntBASIC4.65□□□□□ -1.67
EBF3Q9H4W6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EBF3Q9H4W6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC125257.1-201ENST00000560400 2930 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AL121657.1-201ENST00000327215 531 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RNA5SP27-201ENST00000363839 119 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RNU4-7P-201ENST00000364758 141 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 OR5H15-201ENST00000383696 930 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RPL23AP26-201ENST00000412728 464 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 MTND4P20-201ENST00000424125 869 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 FO393419.3-201ENST00000428741 282 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AL592437.1-201ENST00000443781 492 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RPL23AP43-201ENST00000446445 471 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC097262.1-201ENST00000452559 548 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 RPL7AP52-201ENST00000458096 790 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 SRRM1P2-201ENST00000464531 1192 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 CDH12P2-201ENST00000504393 298 ntBASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.64□□□□□ -1.67
EBF3Q9H4W6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms