Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 U3.4-201ENST00000363352 213 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 RNU6-723P-201ENST00000383973 107 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 RNU6-171P-201ENST00000384354 107 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL138880.1-201ENST00000405824 642 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC004022.2-201ENST00000413824 193 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 COX6CP15-201ENST00000426313 211 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC096638.2-201ENST00000434965 711 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL831737.1-201ENST00000441288 271 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL163193.1-201ENST00000444895 788 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 TRBV26-201ENST00000456572 344 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC006499.3-201ENST00000506077 748 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC004980.4-201ENST00000513375 203 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP43-201ENST00000516559 110 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC087276.1-201ENST00000529659 480 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 OR11J2P-201ENST00000555298 907 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 PCMTD1P2-201ENST00000565017 355 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 MIR5186-201ENST00000577504 120 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 RSL24D1P11-201ENST00000591045 491 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL391497.1-201ENST00000608671 547 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC093799.2-201ENST00000610062 578 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL133243.1-201ENST00000614487 366 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL356596.1-201ENST00000624230 379 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL353662.3-201ENST00000625131 237 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM54Q9BYV2 AC114546.3-201ENST00000623582 1734 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 OR4G11P-202ENST00000642116 1414 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC008549.2-201ENST00000333482 706 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RNU4-21P-201ENST00000362802 126 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AP000580.1-201ENST00000404439 358 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RN7SKP229-201ENST00000410465 302 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RN7SKP142-201ENST00000411236 328 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC069218.2-201ENST00000411665 344 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 NUP35P2-201ENST00000416748 943 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AL158073.1-201ENST00000426848 1104 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 ZYG11AP1-201ENST00000430329 837 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 MTND6P18-201ENST00000439477 513 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AP000936.2-201ENST00000447151 681 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AL445433.1-201ENST00000457507 257 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 snoU13.7-201ENST00000459220 104 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RN7SL97P-201ENST00000486780 299 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RN7SL346P-201ENST00000491561 294 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC110792.2-201ENST00000510278 224 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC006499.2-201ENST00000513470 337 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 RNU6-150P-201ENST00000516237 95 ntBASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM54Q9BYV2 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms