Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL035407.2-201ENST00000454090 378 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 TRBV8-2-201ENST00000475637 270 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 RPL30P11-201ENST00000495304 339 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC112518.2-201ENST00000508565 425 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 RNU6-352P-201ENST00000516908 107 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 HMGB1P23-201ENST00000518743 568 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC034205.1-201ENST00000520621 638 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AP003717.3-201ENST00000544832 1180 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC008011.1-201ENST00000545989 227 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC025884.1-201ENST00000556034 378 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC090751.1-201ENST00000566966 267 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC120057.2-201ENST00000571520 271 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 KLKP1-201ENST00000595979 403 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC133794.1-201ENST00000602731 914 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 NTAN1P1-201ENST00000603150 646 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC010680.3-201ENST00000604215 520 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL592436.1-201ENST00000605135 558 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL445423.1-201ENST00000609941 536 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 MLECP1-201ENST00000615893 709 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AP000943.4-201ENST00000622912 357 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC103798.2-201ENST00000624292 632 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC080188.3-201ENST00000624842 748 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL138960.2-201ENST00000625145 535 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AF001550.2-201ENST00000636643 217 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC132825.7-201ENST00000638744 335 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 ZNF849P-201ENST00000594711 1566 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AL121657.1-201ENST00000327215 531 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RNU6-932P-201ENST00000391108 106 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AL138878.1-201ENST00000405131 347 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 Z98941.1-201ENST00000407764 100 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 HMGB3P20-201ENST00000417997 600 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC000041.1-201ENST00000439655 175 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 HMGN1P5-201ENST00000448591 263 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AL645939.1-201ENST00000453429 797 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 MRPL35P4-201ENST00000453682 566 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RPL37P3-201ENST00000456825 293 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 FTH1P24-201ENST00000503502 462 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 NAMPTP2-201ENST00000505629 1115 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC112206.4-201ENST00000515142 405 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RNU5A-7P-201ENST00000515979 116 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AP003066.2-201ENST00000529375 555 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 ATP5F1P7-201ENST00000567330 760 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AL591034.3-201ENST00000605511 685 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 uc_338.32-201ENST00000615087 172 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 CDRT1-208ENST00000630868 794 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 AC100871.1-201ENST00000507871 1456 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 RPS4XP5-202ENST00000449995 1334 ntBASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.14□□□□□ -1.91
HDHD3Q9BSH5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms