Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.48□□□□□ -1.85
VGLL1Q99990 BPTFP1-201ENST00000579209 492 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 HMGB2P1-201ENST00000591146 634 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 WISP1-OT1-201ENST00000602893 642 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 MIR4727-201ENST00000622232 55 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AF246928.1-201ENST00000623768 87 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 HSPA8P17-201ENST00000427029 1382 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 IQCB2P-201ENST00000401788 1633 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL391684.1-202ENST00000641293 1636 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 ZFRP1-201ENST00000457579 2970 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VGLL1Q99990 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VGLL1Q99990 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VGLL1Q99990 HMGB1P5-201ENST00000255320 642 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 RNU6-839P-201ENST00000363347 108 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 SNORD74.4-201ENST00000364129 80 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 RNU4-75P-201ENST00000364621 146 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 MIR323B-201ENST00000385269 82 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 Y_RNA.599-201ENST00000410489 109 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 DPPA2P3-201ENST00000411853 655 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 NPM1P11-201ENST00000417106 855 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC093162.1-201ENST00000419682 124 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 RPL21P91-201ENST00000429231 479 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 RPL21P110-201ENST00000433345 446 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 SEPT7P5-201ENST00000434048 306 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AL353706.1-201ENST00000436728 494 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.47□□□□□ -1.85
VGLL1Q99990 MTND1P34-201ENST00000438556 671 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 CEACAMP7-201ENST00000444105 496 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AL162388.1-201ENST00000450912 352 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AURKAPS2-201ENST00000454983 333 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 RPS5P7-201ENST00000456664 608 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC015724.1-201ENST00000478577 156 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC012158.1-204ENST00000483430 465 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 GAPDHP56-201ENST00000506031 988 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 MTCO3P7-201ENST00000510008 774 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC109445.1-201ENST00000512356 383 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 RNU6-1225P-201ENST00000516336 65 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 SCARNA21.2-201ENST00000516600 166 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 NDUFA5P2-201ENST00000519723 344 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 IGLVIV-53-201ENST00000520107 367 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC092851.1-201ENST00000535964 478 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC004217.3-201ENST00000551552 878 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 ACTR3BP3-201ENST00000565577 979 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.47□□□□□ -1.85
VGLL1Q99990 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC004987.4-201ENST00000603383 338 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 DUXAP11-201ENST00000603858 526 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 uc_338.9-201ENST00000617424 182 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC026585.1-201ENST00000619582 524 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AL607023.1-201ENST00000620045 248 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 AC091905.4-201ENST00000623432 202 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 AC098679.5-201ENST00000624394 571 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 ATE1-AS1-202ENST00000636460 506 ntBASIC3.47□□□□□ -1.85
VGLL1Q99990 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VGLL1Q99990 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
VGLL1Q99990 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VGLL1Q99990 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.85
VGLL1Q99990 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms