Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 ELOCP23-201ENST00000452014 332 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 HMGN2P7-201ENST00000456186 273 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 YWHAEP4-201ENST00000505390 198 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 RNU1-41P-201ENST00000516161 162 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 RNU1-48P-201ENST00000516400 162 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 AL512310.1-201ENST00000548639 172 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 AL133457.1-201ENST00000564251 987 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 ELOCP29-201ENST00000588193 334 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 MIR622-201ENST00000638396 96 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 AC068647.1-201ENST00000489539 2265 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 AC104446.1-201ENST00000613728 1321 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT140Q96RY7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 AL391417.1-201ENST00000404100 426 ntBASIC5.36□□□□□ -1.55
IFT140Q96RY7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 RPL7P36-201ENST00000444633 681 ntBASIC5.36□□□□□ -1.55
IFT140Q96RY7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
IFT140Q96RY7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.36□□□□□ -1.55
IFT140Q96RY7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT140Q96RY7 MIR4435-1-201ENST00000582552 80 ntBASIC5.36□□□□□ -1.55
IFT140Q96RY7 AL078595.2-201ENST00000605309 1780 ntBASIC5.36□□□□□ -1.55
IFT140Q96RY7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT140Q96RY7 MTCO1P8-201ENST00000416914 1523 ntBASIC5.36□□□□□ -1.55
IFT140Q96RY7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
IFT140Q96RY7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.35□□□□□ -1.55
IFT140Q96RY7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.35□□□□□ -1.55
IFT140Q96RY7 AP000942.1-201ENST00000463969 747 ntBASIC5.35□□□□□ -1.55
IFT140Q96RY7 AC022795.1-201ENST00000473808 480 ntBASIC5.35□□□□□ -1.55
IFT140Q96RY7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.35□□□□□ -1.55
IFT140Q96RY7 AC015849.2-201ENST00000605738 409 ntBASIC5.35□□□□□ -1.55
IFT140Q96RY7 AC231759.1-201ENST00000616455 597 ntBASIC5.35□□□□□ -1.55
IFT140Q96RY7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
IFT140Q96RY7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.35□□□□□ -1.55
IFT140Q96RY7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
IFT140Q96RY7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
IFT140Q96RY7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 YWHAQP9-201ENST00000445891 512 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 AC087312.1-201ENST00000471411 480 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 RPL21P6-201ENST00000479171 504 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 RNA5SP367-201ENST00000516557 118 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 AC009812.2-201ENST00000517657 457 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 BRDTP1-201ENST00000605735 677 ntBASIC5.34□□□□□ -1.55
IFT140Q96RY7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.34□□□□□ -1.55
IFT140Q96RY7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
IFT140Q96RY7 AC000403.1-201ENST00000613696 3585 ntBASIC5.34□□□□□ -1.56
IFT140Q96RY7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 SNORA71.1-201ENST00000364523 117 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 RNU6-283P-201ENST00000364788 107 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 XGY1-201ENST00000381172 446 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC012065.2-201ENST00000421295 375 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 ELOCP18-201ENST00000434209 337 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 TXNP1-201ENST00000441872 371 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC087241.4-201ENST00000612441 480 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT140Q96RY7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT140Q96RY7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC138393.1-206ENST00000540997 1886 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC006504.1-201ENST00000562493 3666 ntBASIC5.33□□□□□ -1.56
IFT140Q96RY7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT140Q96RY7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 SEPT14P1-201ENST00000458703 648 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 uc_338.25-201ENST00000613756 156 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms