Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 C4BPAP1-201ENST00000415474 1893 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 MAPK10-383ENST00000642032 3390 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 SNORA38B-201ENST00000363524 131 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 RNU4-34P-201ENST00000410431 124 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC004383.1-201ENST00000438135 289 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 NDUFB1P2-201ENST00000449477 176 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 SNORD5.1-201ENST00000458800 75 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC026336.1-201ENST00000466577 351 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC063943.2-201ENST00000495697 534 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 RPS26P24-201ENST00000497656 331 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC105758.1-201ENST00000506038 399 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 RPS27AP18-201ENST00000515536 459 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 CDH12P4-201ENST00000517835 295 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 CDH12P3-201ENST00000517935 295 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 CDH12P1-201ENST00000518435 295 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AP001858.2-201ENST00000536213 601 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AL138825.1-201ENST00000618587 192 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 MIR6810-201ENST00000622701 70 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AL445363.3-201ENST00000623080 671 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AC073488.9-201ENST00000631601 754 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.28
LRCH3Q96II8 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.09□□□□□ -1.28
LRCH3Q96II8 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 RNU6-179P-201ENST00000363350 107 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RNA5SP172-201ENST00000365061 118 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RNU6-306P-201ENST00000384617 107 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 Y_RNA.551-201ENST00000384661 102 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 SNORA41-201ENST00000384675 132 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AL359643.1-201ENST00000404109 423 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 CYCSP17-201ENST00000407870 315 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RNA5SP36-201ENST00000410197 133 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC096664.2-201ENST00000411843 406 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RPL7P37-201ENST00000425095 738 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC073069.1-201ENST00000428657 441 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 USP9YP30-201ENST00000430729 455 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RPS3AP12-201ENST00000443616 753 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 CFL1P4-201ENST00000451536 498 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RPL9P32-201ENST00000464118 620 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 RN7SL187P-201ENST00000495587 303 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC083829.1-201ENST00000503756 657 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 FTH1P21-201ENST00000512179 511 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AP003733.2-201ENST00000529409 171 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC022404.1-201ENST00000555320 273 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC008687.2-201ENST00000597865 520 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AC012669.1-201ENST00000603209 283 ntBASIC7.08□□□□□ -1.28
LRCH3Q96II8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LRCH3Q96II8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.08□□□□□ -1.28
LRCH3Q96II8 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.07□□□□□ -1.28
LRCH3Q96II8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.07□□□□□ -1.28
LRCH3Q96II8 AC127070.3-201ENST00000503695 3263 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms