Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 FAR2P2-201ENST00000413041 594 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC234782.4-201ENST00000417646 1048 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MTND2P16-201ENST00000419987 799 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 UQCRBP1-201ENST00000421129 336 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 RPL12P34-201ENST00000424532 479 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 FAR2P4-202ENST00000425399 584 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MTCO2P20-201ENST00000437339 673 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC007327.1-201ENST00000447461 264 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC239809.1-201ENST00000450470 217 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC096992.1-201ENST00000459808 709 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC006511.1-201ENST00000470614 315 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MTND2P38-201ENST00000522536 667 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MTATP6P15-201ENST00000527233 835 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC090515.3-201ENST00000560431 315 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC069061.3-201ENST00000582254 823 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC069366.1-201ENST00000583159 838 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC008782.1-201ENST00000603386 430 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL355816.1-201ENST00000607951 118 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL158163.2-201ENST00000619110 700 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AC114546.3-201ENST00000623582 1734 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 AL118496.1-201ENST00000440201 1812 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 SNORA37-201ENST00000384504 129 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MIR141-201ENST00000384975 95 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MIR1179-201ENST00000408703 91 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC016397.1-201ENST00000412463 242 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MTCO1P3-201ENST00000429327 192 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 CEACAMP1-201ENST00000434624 1035 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MTCYBP31-201ENST00000438855 1122 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC104306.1-201ENST00000449702 371 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 RPS27P23-201ENST00000487608 251 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC008885.2-201ENST00000509506 930 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC068446.3-201ENST00000555285 382 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC007599.1-201ENST00000568688 1174 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MIR3912-201ENST00000577566 105 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC061975.8-201ENST00000587058 721 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 NIFKP6-201ENST00000598115 845 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC091057.2-201ENST00000602594 792 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC068790.5-201ENST00000602741 355 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 MIR6798-201ENST00000612887 67 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 AC008013.2-202ENST00000637965 364 ntBASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A1Q8WWI5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms