Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC232271.1-201ENST00000602455 2715 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MFSD8-239ENST00000641590 2479 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AL592429.1-201ENST00000403909 1473 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RNU1-19P-201ENST00000363306 165 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 Y_RNA.193-201ENST00000363979 102 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 Y_RNA.445-201ENST00000384168 102 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RPS4XP8-201ENST00000402039 771 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AL390316.1-201ENST00000406279 553 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 VN1R8P-201ENST00000407739 893 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 NANOGP6-201ENST00000429190 847 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RPL7P29-201ENST00000437151 728 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 CBX1P1-201ENST00000440184 427 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AL731563.1-201ENST00000442202 214 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 DUTP1-201ENST00000493631 470 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC098799.3-201ENST00000506095 438 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC005741.1-201ENST00000511094 432 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AP002812.4-201ENST00000532139 286 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MIR544B-201ENST00000582372 78 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC234782.5-201ENST00000617723 324 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC005899.7-201ENST00000618199 588 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 MIR6837-201ENST00000620884 64 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC091925.1-201ENST00000623204 462 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 AC004076.2-201ENST00000620532 3323 ntBASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHKBP1Q8TBC3 LINC00561-201ENST00000565815 2738 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 LINC01963-201ENST00000562038 3148 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC068050.1-201ENST00000394891 380 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL354868.1-201ENST00000417077 482 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 SETP9-201ENST00000423837 832 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 NIPA2P1-201ENST00000426223 976 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 OR51AB1P-201ENST00000429046 620 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MTCYBP9-201ENST00000431021 303 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL606489.2-201ENST00000433886 234 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 CYCSP12-201ENST00000437729 300 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RNU6-261P-201ENST00000459506 102 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RPS23P2-201ENST00000463671 415 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MRPS17P3-201ENST00000465453 385 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RN7SL51P-201ENST00000468230 285 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RPS4XP1-201ENST00000482189 787 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RPL32P9-201ENST00000487963 407 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AF213884.1-201ENST00000488102 463 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RN7SL30P-201ENST00000488416 306 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC008953.1-201ENST00000497334 318 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC024558.1-201ENST00000505008 528 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC006499.3-201ENST00000506077 748 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 RNU6-885P-201ENST00000516607 104 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 BTF3P12-201ENST00000519620 469 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL117187.1-201ENST00000555482 181 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC044860.2-201ENST00000561005 179 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MIR4742-201ENST00000581069 85 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL109918.3-201ENST00000603072 338 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AC021646.1-201ENST00000605469 484 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 MIR98-201ENST00000606724 119 ntBASIC5.9□□□□□ -1.46
SHKBP1Q8TBC3 AL512329.2-201ENST00000607350 548 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms