Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC062029.1-202ENST00000606164 3651 ntBASIC6.63□□□□□ -1.35
RNF135Q8IUD6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF135Q8IUD6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF658B-201ENST00000602828 3408 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC009779.8-201ENST00000641684 4384 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC067945.1-201ENST00000342609 618 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RNA5SP333-201ENST00000363466 118 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RNA5SP334-201ENST00000364825 118 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.618-201ENST00000410949 107 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 SDHDP6-201ENST00000414693 480 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AL590233.1-201ENST00000430017 456 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC108734.1-201ENST00000439549 399 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 FHP1-201ENST00000442741 703 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AP006222.1-205ENST00000450734 457 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 NANOGP10-201ENST00000453325 895 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 Y_RNA.635-201ENST00000459041 101 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RNU6-1208P-201ENST00000459588 107 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RN7SL643P-201ENST00000471845 291 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC004062.1-201ENST00000509926 645 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC026801.2-201ENST00000515352 425 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RPL7P20-201ENST00000520308 745 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 MRPS16P1-201ENST00000523462 412 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 IGLV3-6-201ENST00000523937 250 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC018552.3-201ENST00000567416 561 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AL627309.6-201ENST00000606857 840 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC023813.4-201ENST00000607580 580 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 OR6R2P-201ENST00000609216 300 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 uc_338.15-201ENST00000615470 191 ntBASIC6.62□□□□□ -1.35
RNF135Q8IUD6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF135Q8IUD6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 MTCO1P12-201ENST00000414273 1543 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL359976.1-201ENST00000418655 3528 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC011933.2-201ENST00000578539 2790 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 SNORA22B-201ENST00000383876 138 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 RNY4P36-201ENST00000391116 96 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL359634.1-202ENST00000404721 284 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 NMD3P2-201ENST00000421815 761 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL355433.1-201ENST00000422804 300 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC130360.1-201ENST00000425489 1117 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 MTCYBP9-201ENST00000431021 303 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 OR7E116P-201ENST00000448529 957 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 RN7SL369P-201ENST00000477138 299 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC005726.1-201ENST00000494679 427 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 HMGB3P15-201ENST00000507326 574 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC130365.2-201ENST00000525882 1201 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AP005639.1-201ENST00000526939 192 ntBASIC6.61□□□□□ -1.35
RNF135Q8IUD6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF135Q8IUD6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms