Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNF138P1-201ENST00000502765 546 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC108145.1-201ENST00000503770 153 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MTCO1P35-201ENST00000515270 228 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RNU6-276P-201ENST00000516114 96 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MIR2116-201ENST00000517221 80 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR8I1P-201ENST00000529291 931 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR5BC1P-201ENST00000529327 739 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC122134.1-202ENST00000569111 1201 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC099676.1-201ENST00000608886 657 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AL445567.2-201ENST00000618935 498 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MIR3653-201ENST00000625572 110 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC099654.8-201ENST00000637757 681 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC005261.4-201ENST00000600047 1385 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 HMGB1P5-201ENST00000255320 642 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 SNORD74.4-201ENST00000364129 80 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL583835.1-201ENST00000399570 407 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 MTND4P3-201ENST00000417829 541 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL132765.1-201ENST00000434165 553 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 SDR42E1P3-201ENST00000438345 502 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC114755.5-201ENST00000447760 831 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 MRPL42P4-201ENST00000453267 443 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 RPL6P9-201ENST00000466502 859 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 RPL35AP15-201ENST00000468042 339 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC018635.1-201ENST00000468292 1030 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC146507.1-201ENST00000468335 354 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC079203.1-201ENST00000487972 404 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 RNA5SP135-201ENST00000517019 125 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 MRPL49P2-201ENST00000521066 465 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 MTCO3P15-201ENST00000526563 574 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 CYCSP29-201ENST00000533731 318 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 BNIP3P5-201ENST00000562290 498 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC096947.1-201ENST00000603233 470 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL445435.1-201ENST00000604232 665 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AP003973.1-201ENST00000604639 691 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AL031666.3-201ENST00000609320 1006 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AP000255.1-201ENST00000610276 676 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC007546.1-201ENST00000619452 559 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC009269.6-201ENST00000621778 588 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AP003485.1-201ENST00000625093 753 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 AC087821.2-201ENST00000637086 450 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 FP325313.1-201ENST00000638228 703 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF39Q86UA1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.42□□□□□ -1.7
PRPF39Q86UA1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 MTND5P31-201ENST00000419366 1374 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RNA5SP479-201ENST00000364858 117 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 AL139098.1-201ENST00000407291 389 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RN7SKP263-201ENST00000411194 309 ntBASIC4.41□□□□□ -1.7
PRPF39Q86UA1 RPS7P9-201ENST00000414704 586 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms