Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC053481.1-201ENST00000467217 306 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC006463.2-201ENST00000473326 348 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 RPL31P13-201ENST00000484151 370 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC110760.3-202ENST00000515177 371 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 MTND2P32-201ENST00000521584 1038 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC044913.1-201ENST00000557200 430 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AP005137.2-201ENST00000609238 400 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL157392.4-201ENST00000609756 345 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC012409.3-201ENST00000611343 981 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL592148.2-201ENST00000612210 372 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC010975.3-201ENST00000618727 978 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 OR1S1-201ENST00000624470 978 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 MIR4278-201ENST00000636094 69 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC139769.1-204ENST00000472297 1931 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 NXPH1-205ENST00000602349 1953 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC116096.1-201ENST00000566804 2314 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RNA5SP307-201ENST00000362863 116 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MIR607-201ENST00000385241 96 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 TMSB4XP8-201ENST00000402089 135 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AL079342.2-201ENST00000403367 482 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MTATP6P20-201ENST00000414147 562 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 TMSB4XP6-201ENST00000415187 135 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 TMSB4XP1-201ENST00000424567 135 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC096632.1-201ENST00000427395 310 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MTCYBP32-201ENST00000427945 1084 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RPL36P19-201ENST00000430744 301 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RAB11AP1-201ENST00000442978 646 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 HMGB3P6-201ENST00000444896 598 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MRPL42P4-201ENST00000453267 443 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RPL9P32-201ENST00000464118 620 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RPL21P126-201ENST00000470049 478 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC069528.1-202ENST00000482888 637 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC090013.1-201ENST00000485147 480 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC104057.1-201ENST00000515547 497 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 OR5D17P-201ENST00000531492 978 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms