Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC004948.1-201ENST00000609858 672 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC005962.2-201ENST00000611427 652 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC008083.4-201ENST00000615076 444 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AF246928.1-201ENST00000623768 87 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC091965.5-201ENST00000624785 342 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL391684.1-202ENST00000641293 1636 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL442639.1-201ENST00000625030 1899 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNU6-216P-201ENST00000363282 104 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNA5SP391-201ENST00000363456 119 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNU6-1293P-201ENST00000384077 107 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL645733.1-201ENST00000402250 217 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 TIMM9P2-201ENST00000419324 266 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 snoU13.20-201ENST00000459180 104 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 RPL30P6-201ENST00000475925 342 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 FTH1P24-201ENST00000503502 462 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 HMGB1P28-201ENST00000507778 552 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC005178.1-201ENST00000508392 440 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC117532.1-201ENST00000514638 323 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNA5SP228-201ENST00000516232 133 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNA5SP34-201ENST00000516887 130 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC063949.1-201ENST00000552900 865 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHFQ7M4L6 MIR3915-201ENST00000578518 97 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC008638.3-201ENST00000603341 463 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC087763.1-201ENST00000603391 286 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AP000811.1-201ENST00000603803 651 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 DUXAP11-201ENST00000603858 526 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC069304.2-201ENST00000605154 435 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL391358.1-201ENST00000605342 190 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC006270.3-201ENST00000605967 1036 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL023881.1-201ENST00000621088 301 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 RNU6-156P-201ENST00000621869 107 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC091931.1-201ENST00000623488 728 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 AC009229.4-201ENST00000623854 1947 ntBASIC4.14□□□□□ -1.75
SHFQ7M4L6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.14□□□□□ -1.75
SHFQ7M4L6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHFQ7M4L6 XPOTP1-201ENST00000443317 2398 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHFQ7M4L6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHFQ7M4L6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHFQ7M4L6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHFQ7M4L6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHFQ7M4L6 Y_RNA.318-201ENST00000365131 97 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 RNU6-657P-201ENST00000383904 107 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHFQ7M4L6 SNORA68.2-201ENST00000391263 128 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 DSTNP4-201ENST00000399472 474 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 Z98745.1-201ENST00000402553 494 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SHFQ7M4L6 RN7SKP267-201ENST00000410381 285 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 RN7SKP213-201ENST00000410746 298 ntBASIC4.13□□□□□ -1.75
SHFQ7M4L6 RNA5SP104-201ENST00000410989 118 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms