Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ASNSP1-204ENST00000641977 1664 ntBASIC4□□□□□ -1.77
RFWD3Q6PCD5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC008432.1-201ENST00000615912 1320 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 OR4A15-201ENST00000314706 1035 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 U1.1-201ENST00000384101 164 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 MIR320B1-201ENST00000390209 79 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 RNU6-796P-201ENST00000391086 107 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AL590704.1-201ENST00000402856 794 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 RHEBP3-201ENST00000411920 351 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 OR4F13P-201ENST00000428478 931 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 ATP5HP2-201ENST00000433885 485 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC239367.2-201ENST00000447309 705 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 RPL7P24-201ENST00000493052 752 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC010627.1-201ENST00000503819 1294 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC133963.2-201ENST00000513686 578 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC112198.4-201ENST00000515450 351 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 IGHV3-32-201ENST00000519182 355 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AL109741.3-201ENST00000561748 592 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC083899.3-201ENST00000603413 594 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 uc_338.32-201ENST00000615087 172 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC011472.4-201ENST00000615848 491 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AL136964.1-201ENST00000622038 2990 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
RFWD3Q6PCD5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AL355143.1-201ENST00000407101 841 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 BX664727.1-201ENST00000416024 466 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 PNRC2P1-201ENST00000423940 420 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 RRM2P4-201ENST00000441721 562 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 RPS17P13-201ENST00000448974 407 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 HMGB1P26-201ENST00000452520 628 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CYCSP20-201ENST00000473154 315 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 HMGB1P23-201ENST00000518743 568 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 VN1R84P-201ENST00000593697 235 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC133794.1-201ENST00000602731 914 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 MRPS35P3-201ENST00000603189 709 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC026741.1-201ENST00000605892 482 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC024933.1-201ENST00000608472 348 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC024023.1-201ENST00000624530 922 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 LINC00561-201ENST00000565815 2738 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFWD3Q6PCD5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RFWD3Q6PCD5 MTCO1P14-201ENST00000441695 1559 ntBASIC3.97□□□□□ -1.77
RFWD3Q6PCD5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFWD3Q6PCD5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFWD3Q6PCD5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms