Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AL603766.1-201ENST00000407763 664 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AC008264.1-201ENST00000447612 367 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 HSPE1P22-201ENST00000456856 327 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 RNU7-157P-201ENST00000459600 66 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 MTND6P6-201ENST00000478031 263 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 FCF1P8-201ENST00000510322 597 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 GTF2IP8-201ENST00000560687 584 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 MIMT1-201ENST00000597105 1050 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 SNORD39.4-201ENST00000620099 78 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AC095050.2-201ENST00000510748 1458 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 MIR128-1-201ENST00000384921 82 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AL513174.1-201ENST00000423182 629 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AL512649.1-201ENST00000428997 581 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 S100A11P1-201ENST00000477525 312 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 RNU1-103P-201ENST00000516502 125 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 AL354976.1-201ENST00000613843 387 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.11□□□□□ -1.75
RFX7Q2KHR2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX7Q2KHR2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 RNA5SP31-201ENST00000411144 127 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 RPF2P1-201ENST00000424137 906 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 DDX6P1-205ENST00000441966 1436 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC097262.1-201ENST00000452559 548 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 RPL5P24-201ENST00000463742 885 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC068446.3-201ENST00000555285 382 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX7Q2KHR2 AL513477.2-201ENST00000607858 568 ntBASIC4.1□□□□□ -1.75
RFX7Q2KHR2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 MTND4P10-201ENST00000446199 1363 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RN7SKP44-201ENST00000363602 316 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RNA5SP229-201ENST00000410809 99 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AC096664.2-201ENST00000411843 406 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 MTND4LP12-201ENST00000448237 295 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RPL12P26-201ENST00000452430 487 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RPL32P34-201ENST00000486380 400 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RFPL4AP3-201ENST00000515267 345 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AC021733.2-201ENST00000518830 497 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 MIR5004-201ENST00000579078 107 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 MIR4276-201ENST00000584832 70 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 AL139286.1-201ENST00000604465 483 ntBASIC4.09□□□□□ -1.75
RFX7Q2KHR2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.09□□□□□ -1.75
RFX7Q2KHR2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
RFX7Q2KHR2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
RFX7Q2KHR2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RFX7Q2KHR2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms