Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 COX6CP17-201ENST00000421389 185 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 PGBD4P6-201ENST00000421501 610 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RPL7L1P9-201ENST00000431298 745 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RPS17P8-201ENST00000434525 335 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 PSMD10P3-201ENST00000437000 448 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RANP2-201ENST00000456833 229 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 PRELID3BP1-201ENST00000457142 540 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL049779.2-201ENST00000553847 315 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 MIR4330-201ENST00000579077 105 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC015818.6-201ENST00000584274 634 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL670379.11-201ENST00000604059 253 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL670379.10-201ENST00000604330 253 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL670379.12-201ENST00000605291 253 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL670379.9-201ENST00000605428 253 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AL022394.1-201ENST00000606979 292 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC015967.1-201ENST00000619893 476 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC119744.1-201ENST00000454746 1715 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
RSPO4Q2I0M5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AP004289.1-201ENST00000436307 2205 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RPL23P2-201ENST00000320371 421 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RPL23AP57-201ENST00000332361 466 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RPL32P3-201ENST00000359025 275 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.389-201ENST00000383924 113 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.414-201ENST00000384011 101 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RNU4-31P-201ENST00000384211 141 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 SSXP10-201ENST00000402595 565 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MIR320C1-201ENST00000408566 88 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RPL36P18-201ENST00000419316 318 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 UQCRBP1-201ENST00000421129 336 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RGS17P1-201ENST00000423358 553 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AL132765.1-201ENST00000434165 553 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AL353093.1-201ENST00000441292 436 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MGAT2P1-201ENST00000449718 797 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 SLC25A51P1-201ENST00000468432 871 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RN7SL583P-201ENST00000475692 287 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RN7SL222P-201ENST00000476452 299 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC097473.1-201ENST00000508142 408 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RNU4-29P-201ENST00000515943 174 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.661-201ENST00000516003 99 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RNU6-150P-201ENST00000516237 95 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RNU6-1088P-201ENST00000516850 104 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 RNA5SP135-201ENST00000517019 125 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AP001804.3-201ENST00000525146 880 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AP003072.2-201ENST00000527756 676 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 OR4R1P-201ENST00000529879 463 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 HMGB1P42-201ENST00000532126 553 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 OR8R1P-201ENST00000543943 764 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC096996.1-201ENST00000563813 325 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC015720.2-201ENST00000567709 334 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MIR3942-201ENST00000585264 109 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 UGT2B27P-201ENST00000505092 1620 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms