Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 AC119744.1-201ENST00000454746 1715 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX4Q06945 AL121886.1-201ENST00000358609 435 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SOX4Q06945 MIR133B-201ENST00000362210 119 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RNU6-251P-201ENST00000363235 104 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 Y_RNA.128-201ENST00000363391 112 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 Y_RNA.474-201ENST00000384341 102 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 MIR559-201ENST00000385188 96 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RPL11P3-201ENST00000395256 523 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 MIR1286-201ENST00000408112 78 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 DPPA2P3-201ENST00000411853 655 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 ELOCP4-201ENST00000420090 333 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 NCOR1P3-201ENST00000420479 303 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 OR10T1P-201ENST00000424327 947 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RPL7L1P9-201ENST00000431298 745 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 RNU6-261P-201ENST00000459506 102 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RPS27AP17-201ENST00000463344 455 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 RN7SL515P-201ENST00000463999 297 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 RN7SL727P-201ENST00000482164 296 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC008953.1-201ENST00000497334 318 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC112206.3-201ENST00000514578 389 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 PMS2P3-207ENST00000529061 717 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 DUX4L52-201ENST00000549363 777 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 AC005668.1-201ENST00000571142 476 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 SDR42E1P1-201ENST00000611327 477 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 AL352984.2-202ENST00000613699 155 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.94□□□□□ -1.46
SOX4Q06945 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 AC245100.2-201ENST00000454544 1679 ntBASIC5.94□□□□□ -1.46
SOX4Q06945 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SOX4Q06945 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.94□□□□□ -1.46
SOX4Q06945 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SOX4Q06945 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC116158.1-201ENST00000560231 2129 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 AC144833.1-201ENST00000567953 4089 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 RNU6-223P-201ENST00000362830 107 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 Y_RNA.315-201ENST00000365117 102 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 RNU6-456P-201ENST00000384493 107 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 RNU1-149P-201ENST00000390870 161 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 RNU6-510P-201ENST00000391239 108 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 MRPL42P2-201ENST00000403169 426 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AL590290.1-201ENST00000405336 380 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX4Q06945 RNU2-28P-201ENST00000410457 189 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC073136.2-201ENST00000417282 849 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AL163193.1-201ENST00000444895 788 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 RN7SKP99-201ENST00000517028 307 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AC107953.1-201ENST00000522216 297 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC087241.2-201ENST00000535801 324 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 AP005403.1-201ENST00000579720 229 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 MIR4433B-201ENST00000581329 102 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms