Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 RNVU1-3-201ENST00000364313 161 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 SNORA75-201ENST00000384158 137 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 U3.28-201ENST00000391249 210 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 ENSAP1-201ENST00000392855 326 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 RPS3AP23-201ENST00000401762 784 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 Y_RNA.599-201ENST00000410489 109 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 MTCO1P21-201ENST00000416634 589 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 GLRXP1-201ENST00000423261 334 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 AL138785.1-201ENST00000425821 331 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 RPS3AP54-201ENST00000435535 734 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AL356276.2-201ENST00000435919 558 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AL589765.3-201ENST00000446084 462 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC002381.1-201ENST00000447049 280 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC105399.1-202ENST00000447303 205 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 PTMAP3-201ENST00000447474 330 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AZGP1P2-201ENST00000454506 345 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 GYG1P1-201ENST00000460864 698 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 FTH1P2-201ENST00000466086 412 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 SNRPCP2-201ENST00000504370 475 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 RN7SKP277-201ENST00000516895 283 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX6-1P78426 ELOCP28-201ENST00000590044 317 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AL136363.2-201ENST00000604173 851 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 AL445264.1-201ENST00000621719 171 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NKX6-1P78426 TEX21P-201ENST00000447107 1476 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NKX6-1P78426 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 LINC01355-201ENST00000566551 5444 ntBASIC4.73□□□□□ -1.65
NKX6-1P78426 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC097714.1-201ENST00000511272 1647 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC011493.1-201ENST00000596753 1632 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX6-1P78426 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 OR11H4-201ENST00000315409 1082 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 RNY4P24-201ENST00000362735 96 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 RNA5SP335-201ENST00000363817 110 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 SNORD82-201ENST00000365530 70 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 SNORA67-201ENST00000384423 137 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX6-1P78426 Y_RNA.619-201ENST00000410951 90 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 MTCO1P17-201ENST00000411522 491 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 GPS2P1-201ENST00000411761 986 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 RPSAP35-201ENST00000413753 818 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC004987.3-201ENST00000413879 771 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 Z97055.1-201ENST00000419730 712 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 OFD1P18Y-201ENST00000420889 959 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms