Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC100871.1-201ENST00000507871 1456 ntBASIC3.6□□□□□ -1.83
LMO4P61968 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LMO4P61968 FAM133CP-201ENST00000332869 704 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RNA5SP307-201ENST00000362863 116 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RNA5SP27-201ENST00000363839 119 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 AC019155.1-201ENST00000382242 574 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RNU1-13P-201ENST00000384499 162 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RNU6-192P-201ENST00000391253 100 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC097374.1-203ENST00000400783 485 ntBASIC3.59□□□□□ -1.83
LMO4P61968 MTCO1P56-201ENST00000401674 224 ntBASIC3.59□□□□□ -1.83
LMO4P61968 GSTA8P-201ENST00000404253 637 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL590084.1-201ENST00000407885 387 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 RN7SKP235-201ENST00000410662 305 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SNORA74C-2-201ENST00000411179 201 ntBASIC3.59□□□□□ -1.83
LMO4P61968 CTSL3P-202ENST00000412179 788 ntBASIC3.59□□□□□ -1.83
LMO4P61968 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 HMGB3P31-201ENST00000413333 595 ntBASIC3.59□□□□□ -1.83
LMO4P61968 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 OR6C64P-201ENST00000419708 825 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 RPL36AP10-201ENST00000421785 322 ntBASIC3.59□□□□□ -1.83
LMO4P61968 COX6CP15-201ENST00000426313 211 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 CDY14P-201ENST00000431260 1014 ntBASIC3.59□□□□□ -1.83
LMO4P61968 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 AL353706.1-201ENST00000436728 494 ntBASIC3.59□□□□□ -1.83
LMO4P61968 ISCA1P2-201ENST00000438679 421 ntBASIC3.59□□□□□ -1.83
LMO4P61968 CDY23P-201ENST00000451661 1014 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 NECAP1P2-201ENST00000455668 727 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL133477.1-201ENST00000457472 514 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RNU7-125P-201ENST00000458760 62 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC092754.2-201ENST00000463506 460 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RPL7AP28-201ENST00000464513 571 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RPL35AP15-201ENST00000468042 339 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 RPL23AP37-201ENST00000479658 549 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC108734.3-201ENST00000481241 1165 ntBASIC3.59□□□□□ -1.83
LMO4P61968 RPL23AP44-201ENST00000482216 473 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC023050.1-201ENST00000498198 304 ntBASIC3.59□□□□□ -1.83
LMO4P61968 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 XKRY-201ENST00000510392 1100 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC010625.1-201ENST00000511296 403 ntBASIC3.59□□□□□ -1.83
LMO4P61968 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 COX6B1P6-201ENST00000522347 255 ntBASIC3.59□□□□□ -1.83
LMO4P61968 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.59□□□□□ -1.83
LMO4P61968 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.59□□□□□ -1.83
LMO4P61968 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMO4P61968 AC027104.1-201ENST00000563702 681 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 AP001269.3-201ENST00000588718 329 ntBASIC3.59□□□□□ -1.83
LMO4P61968 VN1R85P-201ENST00000601587 426 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC125494.3-201ENST00000602759 455 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL161729.3-201ENST00000603533 673 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC004492.1-201ENST00000607036 742 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC009237.15-201ENST00000610252 501 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC024941.1-201ENST00000612250 334 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AL354976.1-201ENST00000613843 387 ntBASIC3.59□□□□□ -1.83
LMO4P61968 AC073530.2-201ENST00000623987 261 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.59□□□□□ -1.83
LMO4P61968 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.59□□□□□ -1.83
LMO4P61968 U6.107-201ENST00000637108 79 ntBASIC3.59□□□□□ -1.83
LMO4P61968 FP325313.1-201ENST00000638228 703 ntBASIC3.59□□□□□ -1.83
LMO4P61968 SEC63P2-201ENST00000503863 1939 ntBASIC3.59□□□□□ -1.83
LMO4P61968 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.59□□□□□ -1.83
LMO4P61968 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.59□□□□□ -1.83
LMO4P61968 AC017007.4-201ENST00000503353 1352 ntBASIC3.59□□□□□ -1.83
LMO4P61968 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LMO4P61968 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.59□□□□□ -1.84
LMO4P61968 AL049737.1-201ENST00000413920 1403 ntBASIC3.59□□□□□ -1.84
LMO4P61968 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMO4P61968 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.59□□□□□ -1.84
LMO4P61968 AC015813.6-201ENST00000624409 5808 ntBASIC3.59□□□□□ -1.84
LMO4P61968 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMO4P61968 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMO4P61968 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMO4P61968 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
LMO4P61968 AC134882.1-201ENST00000603738 1676 ntBASIC3.59□□□□□ -1.84
LMO4P61968 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.59□□□□□ -1.84
LMO4P61968 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LMO4P61968 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.58□□□□□ -1.84
LMO4P61968 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms