Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ACTBP60709 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 ZNF542P-204ENST00000482727 1305 ntBASIC3.23□□□□□ -1.89
ACTBP60709 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
ACTBP60709 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 RNA5SP130-201ENST00000364431 114 ntBASIC3.23□□□□□ -1.89
ACTBP60709 SNORA70.2-201ENST00000364506 135 ntBASIC3.23□□□□□ -1.89
ACTBP60709 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 SNORA70C-201ENST00000384538 135 ntBASIC3.23□□□□□ -1.89
ACTBP60709 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 AL022722.2-201ENST00000402519 180 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AL590290.1-201ENST00000405336 380 ntBASIC3.23□□□□□ -1.89
ACTBP60709 CRYBB2P1-203ENST00000415709 538 ntBASIC3.23□□□□□ -1.89
ACTBP60709 LIPT1P1-201ENST00000415870 1186 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 AC241520.1-201ENST00000422654 1099 ntBASIC3.23□□□□□ -1.89
ACTBP60709 RPS27AP12-201ENST00000429552 465 ntBASIC3.23□□□□□ -1.89
ACTBP60709 CKS1BP5-201ENST00000434172 273 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC006480.1-201ENST00000449887 378 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC099563.1-201ENST00000456086 418 ntBASIC3.23□□□□□ -1.89
ACTBP60709 NF1P3-201ENST00000457709 450 ntBASIC3.23□□□□□ -1.89
ACTBP60709 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ACTBP60709 RPL7P19-201ENST00000469948 618 ntBASIC3.23□□□□□ -1.89
ACTBP60709 ACTG1P13-201ENST00000486987 1043 ntBASIC3.23□□□□□ -1.89
ACTBP60709 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.23□□□□□ -1.89
ACTBP60709 AC108941.1-201ENST00000502853 530 ntBASIC3.23□□□□□ -1.89
ACTBP60709 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 AC090071.1-201ENST00000507713 644 ntBASIC3.23□□□□□ -1.89
ACTBP60709 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC117525.1-201ENST00000515228 503 ntBASIC3.23□□□□□ -1.89
ACTBP60709 MTCO1P24-201ENST00000515438 1558 ntBASIC3.23□□□□□ -1.89
ACTBP60709 RNU6-1004P-201ENST00000516584 111 ntBASIC3.23□□□□□ -1.89
ACTBP60709 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.23□□□□□ -1.89
ACTBP60709 HIGD1AP18-201ENST00000520730 278 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.23□□□□□ -1.89
ACTBP60709 OR5AP1P-201ENST00000529730 940 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
ACTBP60709 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.23□□□□□ -1.89
ACTBP60709 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 AC074029.1-201ENST00000552531 1044 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.23□□□□□ -1.89
ACTBP60709 AC025884.1-201ENST00000556034 378 ntBASIC3.23□□□□□ -1.89
ACTBP60709 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.23□□□□□ -1.89
ACTBP60709 MIR3690-201ENST00000580266 75 ntBASIC3.23□□□□□ -1.89
ACTBP60709 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.23□□□□□ -1.89
ACTBP60709 AC138473.1-201ENST00000605717 526 ntBASIC3.23□□□□□ -1.89
ACTBP60709 RNU4-89P-201ENST00000607443 133 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AL354760.1-201ENST00000608357 643 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC110774.1-201ENST00000623567 2018 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.23□□□□□ -1.89
ACTBP60709 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ACTBP60709 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ACTBP60709 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
ACTBP60709 AC123912.3-201ENST00000600907 1367 ntBASIC3.23□□□□□ -1.89
ACTBP60709 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ACTBP60709 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.22□□□□□ -1.89
ACTBP60709 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ACTBP60709 AL121657.1-201ENST00000327215 531 ntBASIC3.22□□□□□ -1.89
ACTBP60709 RNU6-670P-201ENST00000364312 104 ntBASIC3.22□□□□□ -1.89
ACTBP60709 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
ACTBP60709 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.22□□□□□ -1.89
ACTBP60709 AC091390.1-201ENST00000433904 331 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.22□□□□□ -1.89
ACTBP60709 RPS7P7-201ENST00000463499 571 ntBASIC3.22□□□□□ -1.89
ACTBP60709 CYCSP20-201ENST00000473154 315 ntBASIC3.22□□□□□ -1.89
ACTBP60709 RPS3AP50-201ENST00000487064 803 ntBASIC3.22□□□□□ -1.89
ACTBP60709 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.22□□□□□ -1.89
ACTBP60709 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.22□□□□□ -1.89
ACTBP60709 AC021146.7-201ENST00000509604 775 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.22□□□□□ -1.89
ACTBP60709 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.22□□□□□ -1.89
ACTBP60709 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 UBE2NP1-201ENST00000545592 458 ntBASIC3.22□□□□□ -1.89
ACTBP60709 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
ACTBP60709 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.22□□□□□ -1.89
ACTBP60709 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.22□□□□□ -1.89
ACTBP60709 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.22□□□□□ -1.89
ACTBP60709 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.22□□□□□ -1.89
ACTBP60709 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.22□□□□□ -1.89
ACTBP60709 AC011492.1-201ENST00000600023 315 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AL163642.2-201ENST00000604722 1019 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AL450489.1-201ENST00000612071 468 ntBASIC3.22□□□□□ -1.89
ACTBP60709 AC083809.1-201ENST00000615051 472 ntBASIC3.22□□□□□ -1.89
ACTBP60709 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ACTBP60709 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ACTBP60709 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms